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Assembly Name: biogeco2 v2.0

Name: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene12356 biogeco2 v2.0 236
AutoFact: E3 ubiquitin-protein ligase BRE1-like 1 [Arabidopsis thaliana] sp|Q8RXD6.1|BRE1A_ARATH RecName: Full=E3 ubiquitin-protein ligase BRE1-like 1; Short=AtBRE1; AltName: Full=Protein HISTONE MONOUBIQUITINATION 1; Short=AtHUB1 gb|AAL91211.1| unknown protein [Ar 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
biog2_v2.0_unigene12498 biogeco2 v2.0 489
AutoFact: pfam12937, F-box-like, F-box-like 0.0001
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: f-box domain containing protein 0.0
Putative C-terminus
biog2_v2.0_unigene12561 biogeco2 v2.0 436
AutoFact: Nucleoporin 98 n=1 Tax=Daucus carota RepID=A9ZP15_DAUCA 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nucleoporin autopeptidase 0.0
Putative C-terminus
biog2_v2.0_unigene12563 biogeco2 v2.0 533
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein rrp5 homolog 0.0
C-terminus
biog2_v2.0_unigene12595 biogeco2 v2.0 754
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene12784 biogeco2 v2.0 255
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: hypothetical protein SELMODRAFT_440341 [Selaginella moellendorffii] 3.4337e-30
Internal
biog2_v2.0_unigene12795 biogeco2 v2.0 479
AutoFact: nuclear pore complex protein-like protein [Arabidopsis thaliana] dbj|BAB09662.1| unnamed protein product [Arabidopsis thaliana] gb|AED90908.1| nuclear pore complex protein-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nuclear pore complex protein 0.0
Internal
biog2_v2.0_unigene12807 biogeco2 v2.0 416
AutoFact: DUF3510 domain containing protein 2.0e-30
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: conserved oligomeric golgi complex subunit 2-like 0.0
Internal
biog2_v2.0_unigene12868 biogeco2 v2.0 508
AutoFact: Golgi transport complex-related protein [Arabidopsis thaliana] gb|AAG52007.1|AC012563_17 putative golgi transport complex protein; 67058-70172 [Arabidopsis thaliana] gb|AEE34723.1| Golgi transport complex-related protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
N-terminus
biog2_v2.0_unigene12903 biogeco2 v2.0 113
AutoFact: 26S proteasome regulatory subunit N6 [Arabidopsis thaliana] gb|AAF88122.1|AC021043_15 Similar to 26S proteasome subunits [Arabidopsis thaliana] gb|AAK44018.1|AF370203_1 putative 19S proteosome subunit 9 [Arabidopsis thaliana] gb|AAL07160.1| putative 19S p 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene12946 biogeco2 v2.0 365
AutoFact: cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4] sp|Q54KR1.1|SYCC_DICDI RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName: Full=Cysteine--tRNA ligase; Short=CysRS gb|EAL63854.1| cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: cysteinyl-trna synthetase 0.0
Putative C-terminus
biog2_v2.0_unigene13185 biogeco2 v2.0 333
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: e3 ubiquitin-protein ligase rfwd3-like 0.0
Internal
biog2_v2.0_unigene13203 biogeco2 v2.0 522
AutoFact: T-complex protein 11 [Arabidopsis thaliana] gb|AAB72161.1| unknown [Arabidopsis thaliana] gb|AAN41345.1| unknown protein [Arabidopsis thaliana] gb|AEE30311.1| T-complex protein 11 [Arabidopsis thaliana] 1.0e-29
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: t-complex protein 11 6.44376e-40
Internal
biog2_v2.0_unigene13277 biogeco2 v2.0 443
AutoFact: Bax1-I domain containing protein 9.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 4.35192e-24
N-terminus
biog2_v2.0_unigene13510 biogeco2 v2.0 401
AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SKY7_PHYPA 3.0e-29
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: single-strand selective monofunctional uracil dna glycosylase 2.73164e-35
Internal
biog2_v2.0_unigene13527 biogeco2 v2.0 392
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 0.0
Internal
biog2_v2.0_unigene13548 biogeco2 v2.0 497
AutoFact: Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] ref|NP_851037.2| Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] gb|AAM20555.1| alpha-mannosidase [Arabidopsis thaliana] gb|AAN15620.1| alpha-mannosidase [Arabidopsis thaliana] gb|AED 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: lysosomal alpha-mannosidase 0.0
Internal
biog2_v2.0_unigene13552 biogeco2 v2.0 374
AutoFact: C2 domain containing protein 1.0e-10
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene13613 biogeco2 v2.0 348
AutoFact: Catalytic, putative n=1 Tax=Ricinus communis RepID=B9RST1_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: esterase lipase domain-containing protein 0.0
Internal
biog2_v2.0_unigene13638 biogeco2 v2.0 411
AutoFact: DUF936 domain containing protein 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain