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Assembly Name: biogeco2 v2.0

Name: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene9013 biogeco2 v2.0 395
AutoFact: histone RNA hairpin-binding protein [Dictyostelium discoideum AX4] gb|EAL63343.1| histone RNA hairpin-binding protein [Dictyostelium discoideum AX4] 7.0e-21
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: histone rna hairpin-binding protein 2.61714e-36
C-terminus
biog2_v2.0_unigene9054 biogeco2 v2.0 455
AutoFact: CCAAT/enhancer binding protein zeta [Bos taurus] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ccaat enhancer-binding protein zeta-like 0.0
Internal
biog2_v2.0_unigene9060 biogeco2 v2.0 390
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 1.32448e-32
C-terminus
biog2_v2.0_unigene9089 biogeco2 v2.0 668
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
biog2_v2.0_unigene9149 biogeco2 v2.0 343
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: secreted protein 5.03524e-23
Internal
biog2_v2.0_unigene9194 biogeco2 v2.0 426
AutoFact: ubiquitin family protein [Arabidopsis thaliana] gb|AAM98085.1| AT5g42220/K5J14_2 [Arabidopsis thaliana] gb|AAP21172.1| AT5g42220/K5J14_2 [Arabidopsis thaliana] gb|AED94781.1| ubiquitin family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene9244 biogeco2 v2.0 391
AutoFact: metalloendopeptidase [Arabidopsis thaliana] dbj|BAD43951.1| major surface like glycoprotein [Arabidopsis thaliana] dbj|BAD93815.1| major surface like glycoprotein [Arabidopsis thaliana] dbj|BAF02119.1| major surface like glycoprotein [Arabidopsis thaliana 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: major surface like glycoprotein 0.0
Internal
biog2_v2.0_unigene9251 biogeco2 v2.0 515
AutoFact: pyrimidine 5'-nucleotidase -related [Oryza sativa Japonica Group] gb|ABF97906.1| Pyrimidine 5'-nucleotidase family protein, expressed [Oryza sativa Japonica Group] dbj|BAG94395.1| unnamed protein product [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: cytosolic 5 -nucleotidase iii-like protein 0.0
C-terminus
biog2_v2.0_unigene9384 biogeco2 v2.0 276
AutoFact: Signal recognition particle subunit srp72, putative n=1 Tax=Ricinus communis RepID=B9RMK3_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: signal recognition particle subunit srp72 0.0
Internal
biog2_v2.0_unigene9522 biogeco2 v2.0 486
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 3.13389e-19
C-terminus
biog2_v2.0_unigene9651 biogeco2 v2.0 749
AutoFact: kinesin light chain-related protein [Arabidopsis thaliana] gb|AAU94395.1| At5g53080 [Arabidopsis thaliana] gb|AED96301.1| kinesin light chain-related protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene9766 biogeco2 v2.0 226
AutoFact: neutral invertase-like protein [Arabidopsis thaliana] ref|NP_001031790.1| neutral invertase-like protein [Arabidopsis thaliana] emb|CAB45447.1| invertase-like protein [Arabidopsis thaliana] emb|CAB80203.1| invertase-like protein [Arabidopsis thaliana] gb| 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene9932 biogeco2 v2.0 411
AutoFact: Protein transport protein sec23, putative n=1 Tax=Ricinus communis RepID=B9SKJ9_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein transport protein 0.0
C-terminus
biog2_v2.0_unigene10100 biogeco2 v2.0 367
AutoFact: Myosin_tail_1 multi-domain protein 3.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: cgs1 mrna stability 0.0
Putative C-terminus
biog2_v2.0_unigene10209 biogeco2 v2.0 519
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein loc100272339 1.60063e-19
Putative C-terminus
biog2_v2.0_unigene10236 biogeco2 v2.0 387
AutoFact: Os10g0400900 protein (Fragment) n=3 Tax=Oryza sativa Japonica Group RepID=Q0IXT3_ORYSJ 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: colon cancer-associated protein mic1-like containing expressed 0.0
Internal
biog2_v2.0_unigene10444 biogeco2 v2.0 351
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Internal
biog2_v2.0_unigene10514 biogeco2 v2.0 350
AutoFact: metal ion binding 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: coiled-coil domain-containing protein 90b 0.0
C-terminus
biog2_v2.0_unigene10702 biogeco2 v2.0 391
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein 0.0
Putative N-terminus
biog2_v2.0_unigene10773 biogeco2 v2.0 252
AutoFact: ankyrin repeat-containing protein [Arabidopsis thaliana] ref|NP_001031537.1| ankyrin repeat-containing protein [Arabidopsis thaliana] gb|AAC23416.1| expressed protein [Arabidopsis thaliana] gb|AAM98104.1| At2g44090/F6E13.22 [Arabidopsis thaliana] dbj|BAH2 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain