Sustainpine_db
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Assembly Name: biogeco2 v2.0

Name: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene8067 biogeco2 v2.0 331
AutoFact: Valyl-tRNA synthetase, putative n=1 Tax=Ricinus communis RepID=B9SWL0_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: valyl trna synthetase 0.0
Putative C-terminus
biog2_v2.0_unigene8094 biogeco2 v2.0 488
AutoFact: DUF2470 domain containing protein 1.0e-08
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene8168 biogeco2 v2.0 426
AutoFact: pfam00294, PfkB, pfkB family carbohydrate kinase 8.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: carbohydrate pyrimidine family protein 0.0
Internal
biog2_v2.0_unigene8190 biogeco2 v2.0 449
AutoFact: Early-responsive to dehydration stress protein (ERD4) [Arabidopsis thaliana] gb|AAG51102.1|AC025295_10 unknown protein [Arabidopsis thaliana] gb|AAK59597.1| unknown protein [Arabidopsis thaliana] gb|AAL34230.1| unknown protein [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized membrane 0.0
C-terminus
biog2_v2.0_unigene8275 biogeco2 v2.0 491
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene8280 biogeco2 v2.0 650
AutoFact: ribosomal protein L11 methyltransferase [Sulfolobus islandicus M.14.25] ref|YP_002832331.1| ribosomal protein L11 methyltransferase, [Sulfolobus islandicus L.S.2.15] ref|YP_002837762.1| ribosomal protein L11 methyltransferase, [Sulfolobus islandicus Y.G.5 9.0e-21
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ribosomal protein l11 0.0
Complete
biog2_v2.0_unigene8300 biogeco2 v2.0 693
AutoFact: Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana] emb|CAB11468.1| arginyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB38959.1| arginyl-tRNA synthetase [Arabidopsis thaliana] emb|CAB79485.1| arginyl-tRNA synthetase [Arabidopsis thaliana] gb|AEE851 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: arginyl-trna synthetase 0.0
C-terminus
biog2_v2.0_unigene8304 biogeco2 v2.0 541
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein 3.3555e-37
Putative N-terminus
biog2_v2.0_unigene8335 biogeco2 v2.0 586
AutoFact: SIT4 phosphatase-associated family protein [Arabidopsis thaliana] gb|AAM83251.1| At1g07990/T6D22_5 [Arabidopsis thaliana] gb|AAO42781.1| At1g07990/T6D22_5 [Arabidopsis thaliana] gb|AEE28224.1| SIT4 phosphatase-associated family protein [Arabidopsis thalia 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene8378 biogeco2 v2.0 362
AutoFact: putative pre-rRNA processing protein, 5' partial [Arabidopsis thaliana] 7.0e-28
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein rrp5 homolog 9.86014e-33
Internal
biog2_v2.0_unigene8461 biogeco2 v2.0 856
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene8514 biogeco2 v2.0 544
AutoFact: acyl-activating enzyme 17 [Arabidopsis thaliana] gb|AED93113.1| acyl-activating enzyme 17 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: acyl-activating enzyme 17 0.0
C-terminus
biog2_v2.0_unigene8531 biogeco2 v2.0 462
AutoFact: DEAD box protein P68 [Pisum sativum] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene8616 biogeco2 v2.0 531
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
biog2_v2.0_unigene8636 biogeco2 v2.0 554
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ccr4-not transcription complex subunit 10-like 0.0
Putative C-terminus
biog2_v2.0_unigene8655 biogeco2 v2.0 452
AutoFact: Histone mRNA stem-loop binding protein (ISS) [Ostreococcus tauri] emb|CAL52448.1| Histone mRNA stem-loop binding protein (ISS) [Ostreococcus tauri] 2.0e-22
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: histone rna hairpin-binding protein 1.82863e-35
C-terminus
biog2_v2.0_unigene8665 biogeco2 v2.0 959
AutoFact: Zinc finger family protein (Fragment) n=1 Tax=Picea abies RepID=Q3ZDI5_PICAB 2.0e-34
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: zinc finger family protein 3.20617e-42
Complete
biog2_v2.0_unigene8731 biogeco2 v2.0 701
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_156.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7TNX1_VITVI 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: hit-type zinc finger family protein 0.0
N-terminus
biog2_v2.0_unigene8780 biogeco2 v2.0 477
AutoFact: survival of motor neuron protein-interacting protein 1 [Arabidopsis thaliana] gb|AAK25851.1|AF360141_1 unknown protein [Arabidopsis thaliana] gb|AAK64070.1| unknown protein [Arabidopsis thaliana] gb|AEE33090.1| survival of motor neuron protein-interacting 3.0e-40
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: gem-associated protein 2-like 0.0
C-terminus
biog2_v2.0_unigene8885 biogeco2 v2.0 516
AutoFact: RNA polymerase I specific transcription initiation factor RRN3 protein [Arabidopsis thaliana] gb|AAM20140.1| unknown protein [Arabidopsis thaliana] gb|AAN13210.1| unknown protein [Arabidopsis thaliana] gb|AEC09018.1| RNA polymerase I specific transcriptio 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: rna polymerase i-specific transcription initiation factor rrn3-like 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain