Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco2 v2.0

Name: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).

Source: Description from FL-Next


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog2_v2.0_unigene3700 biogeco2 v2.0 413
AutoFact: BCNT [Hyacinthus orientalis] 2.0e-32
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein 0.0
Putative N-terminus
biog2_v2.0_unigene3795 biogeco2 v2.0 466
AutoFact: putative GMP synthase [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: gmp synthase 0.0
C-terminus
biog2_v2.0_unigene3926 biogeco2 v2.0 512
AutoFact: ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] gb|AAY34175.1| At2g12550 [Arabidopsis thaliana] gb|AEC06204.1| ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ubiquitin-associated ts-n domain-containing protein 0.0
Internal
biog2_v2.0_unigene4352 biogeco2 v2.0 412
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 1.01286e-17
C-terminus
biog2_v2.0_unigene4411 biogeco2 v2.0 393
AutoFact: ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] gb|AAY34175.1| At2g12550 [Arabidopsis thaliana] gb|AEC06204.1| ubiquitin-associated (UBA)/TS-N domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ubiquitin-associated ts-n domain-containing protein 0.0
Internal
biog2_v2.0_unigene4645 biogeco2 v2.0 1283
AutoFact: Lipase_3 domain containing protein 2.0e-10
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: predicted protein [Physcomitrella patens subsp. patens] 0.0
C-terminus
biog2_v2.0_unigene4812 biogeco2 v2.0 631
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene4953 biogeco2 v2.0 958
AutoFact: basic helix-loop-helix (bHLH) family transcription factor [Brassica oleracea] 8.0e-17
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 2.15029e-21
Complete
biog2_v2.0_unigene6935 biogeco2 v2.0 558
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
biog2_v2.0_unigene7080 biogeco2 v2.0 1002
AutoFact: T-complex protein 11 [Arabidopsis thaliana] gb|AAB72161.1| unknown [Arabidopsis thaliana] gb|AAN41345.1| unknown protein [Arabidopsis thaliana] gb|AEE30311.1| T-complex protein 11 [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Putative C-terminus
biog2_v2.0_unigene7096 biogeco2 v2.0 585
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ring u-box domain-containing protein 0.0
Putative C-terminus
biog2_v2.0_unigene7183 biogeco2 v2.0 344
AutoFact: Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] gb|EAQ39883.1| Phosphoenolpyruvate carboxykinase (ATP) [Dokdonia donghaensis MED134] 2.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: phosphoenolpyruvate carboxykinase 0.0
C-terminus
biog2_v2.0_unigene7306 biogeco2 v2.0 694
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein 1.67094e-31
N-terminus
biog2_v2.0_unigene7324 biogeco2 v2.0 607
AutoFact: Far-17a_AIG1 domain containing protein 3.0e-32
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: integral membrane 0.0
N-terminus
biog2_v2.0_unigene7483 biogeco2 v2.0 409
AutoFact: Lupus la ribonucleoprotein, putative n=1 Tax=Ricinus communis RepID=B9S0U6_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Internal
biog2_v2.0_unigene7649 biogeco2 v2.0 548
AutoFact: putative transcription regulatory protein [Oryza sativa Japonica Group] gb|ABB47976.2| transcriptional regulator, putative, expressed [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ccr4-not transcription complex subunit 0.0
C-terminus
biog2_v2.0_unigene7781 biogeco2 v2.0 343
AutoFact: alpha-mannosidase [Arabidopsis thaliana] emb|CAA66821.1| alpha-mannosidase [Arabidopsis thaliana] emb|CAA72432.1| alpha-mannosidase precursor [Arabidopsis thaliana] dbj|BAB01735.1| alpha-mannosidase [Arabidopsis thaliana] gb|AAK62592.1| AT3g26720/MLJ15_12 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog2_v2.0_unigene7925 biogeco2 v2.0 563
AutoFact: methionyl-tRNA synthetase [Bacteroides fragilis YCH46] ref|ZP_04843858.1| methionyl-tRNA synthetase [Bacteroides sp. 3_2_5] ref|ZP_06094931.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_16] ref|ZP_08592150.1| methionyl-tRNA synthetase [Bacteroides sp. 2.0e-11
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: methionyl-trna synthetase 0.0
Putative C-terminus
biog2_v2.0_unigene7937 biogeco2 v2.0 565
AutoFact: DUF810 domain containing protein 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: uncharacterized protein loc100248009 0.0
Putative C-terminus
biog2_v2.0_unigene7941 biogeco2 v2.0 512
AutoFact: tetratricopeptide repeat protein 39A isoform 1 [Mus musculus] sp|A2ACP1.1|TT39A_MOUSE RecName: Full=Tetratricopeptide repeat protein 39A; Short=TPR repeat protein 39A emb|CAM13657.1| tetratricopeptide repeat domain 39A [Mus musculus] 2.0e-31
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: tetratricopeptide repeat domain 39a 0.0
C-terminus

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain