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Assembly Name: biogeco3 v1.0

Name: NOT2/NOT3/NOT5

Term: IPR007282  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene3712 biogeco3 v1.0 463
AutoFact: Putative Not1 N-terminal protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Predicted protein; Hordeum vulgare var. distichum (Two-rowed barley). 0.0
Blast2go: ccr4-not transcription complex subunit 3 0.0
N-terminus
biog3_v1.0_unigene5021 biogeco3 v1.0 603
AutoFact: RecName: Full=Probable NOT transcription complex subunit VIP2; AltName: Full=Protein VIRE2 INTERACTING PROTEIN2; Short=NbVIP2 gb|AAY15746.1| VIP2 [Nicotiana benthamiana] 0.0
FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable not transcription complex subunit vip2-like 0.0
Internal
biog3_v1.0_unigene5984 biogeco3 v1.0 1318
AutoFact: Not CCR4-Not complex component, N-terminal; tRNA-binding arm [Medicago truncatula] 0.0
FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene10132 biogeco3 v1.0 354
AutoFact: RecName: Full=Probable NOT transcription complex subunit VIP2; AltName: Full=Protein VIRE2 INTERACTING PROTEIN2; Short=NbVIP2 gb|AAY15746.1| VIP2 [Nicotiana benthamiana] 0.0
FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable not transcription complex subunit vip2-like 0.0
Internal
biog3_v1.0_unigene18627 biogeco3 v1.0 204
AutoFact: RecName: Full=Probable NOT transcription complex subunit VIP2; AltName: Full=Protein VIRE2 INTERACTING PROTEIN2; Short=NbVIP2 gb|AAY15746.1| VIP2 [Nicotiana benthamiana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: probable not transcription complex subunit vip2-like 0.0
Internal
biog3_v1.0_unigene20556 biogeco3 v1.0 229
AutoFact: CCR4-NOT transcription complex subunit, putative n=1 Tax=Ricinus communis RepID=B9SW63_RICCO 3.0e-16
Blast2go: probable not transcription complex subunit vip2-like 2.8186e-18
Putative coding
biog3_v1.0_unigene22501 biogeco3 v1.0 229
AutoFact: RecName: Full=Probable NOT transcription complex subunit VIP2; AltName: Full=Protein VIRE2 INTERACTING PROTEIN2; Short=NbVIP2 gb|AAY15746.1| VIP2 [Nicotiana benthamiana] 0.0
FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable not transcription complex subunit vip2-like 0.0
Internal
biog3_v1.0_unigene25604 biogeco3 v1.0 292
AutoFact: RecName: Full=Probable NOT transcription complex subunit VIP2; AltName: Full=Protein VIRE2 INTERACTING PROTEIN2; Short=NbVIP2 gb|AAY15746.1| VIP2 [Nicotiana benthamiana] 0.0
FL-Next: sp=Probable NOT transcription complex subunit VIP2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable not transcription complex subunit vip2-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain