Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: Pseudouridine synthase II

Term: IPR002501  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene404 biogeco3 v1.0 116
AutoFact: rRNA intron-encoded homing endonuclease [Oryza sativa] 7.0e-17
Blast2go: rrna intron-encoded homing endonuclease 0.0
Putative ncRNA
biog3_v1.0_unigene6029 biogeco3 v1.0 1352
AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] sp|Q9LD90.1|DKC1_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=Nopp-140-associated protein of 57 kDa homolog; Short=AtNAP57; AltName: Full=Nucleolar protein NA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene7518 biogeco3 v1.0 277
AutoFact: Pseudouridylate synthase/ transporter n=1 Tax=Zea mays RepID=B6TRU2_MAIZE 0.0
FL-Next: tr=Pseudouridylate synthase/ transporter; Zea mays (Maize). 0.0
Blast2go: pseudouridylate synthase transporter 0.0
Putative C-terminus
biog3_v1.0_unigene14302 biogeco3 v1.0 204
AutoFact: rRNA intron-encoded homing endonuclease [Oryza sativa] 7.0e-17
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: rrna intron-encoded homing endonuclease 0.0
Putative Complete
biog3_v1.0_unigene17337 biogeco3 v1.0 54
AutoFact: rRNA intron-encoded homing endonuclease [Oryza sativa] 7.0e-17
Blast2go: rrna intron-encoded homing endonuclease 0.0
unknown
biog3_v1.0_unigene19521 biogeco3 v1.0 206
AutoFact: Tesmin/TSO1-like CXC domain-containing protein [Arabidopsis thaliana] emb|CAB43914.1| putative transcription factor [Arabidopsis thaliana] emb|CAB79658.1| putative transcription factor [Arabidopsis thaliana] dbj|BAC43254.1| putative transcription factor [ 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: tesmin tso1-like cxc domain-containing protein 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain