Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Methyl-CpG DNA binding

Term: IPR001739  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene3205 biogeco3 v1.0 858
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear protein x1 0.0
Putative C-terminus
biog3_v1.0_unigene5723 biogeco3 v1.0 374
AutoFact: putative methyl-binding domain protein [Cryptomeria japonica] 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl binding domain protein 3.71356e-20
N-terminus
biog3_v1.0_unigene5794 biogeco3 v1.0 389
AutoFact: CDC6 protein (ISS) [Ostreococcus tauri] emb|CAL51521.1| CDC6 protein (ISS) [Ostreococcus tauri] 0.0
FL-Next: tr=Putative uncharacterized protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene10810 biogeco3 v1.0 1370
AutoFact: methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_974850.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] ref|NP_001190421.1| methyl-CPG-binding domain protein 02 [Arabidopsis thaliana] sp|Q8LA53.1|MBD2_ARATH RecName: Full=M 0.0
FL-Next: sp=Methyl-CpG-binding domain-containing protein 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: methyl-cpg-binding domain protein 02 0.0
Complete
biog3_v1.0_unigene13338 biogeco3 v1.0 307
AutoFact: putative methyl-binding domain protein [Cryptomeria japonica] 5.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl binding domain protein 3.71356e-20
Internal
biog3_v1.0_unigene14675 biogeco3 v1.0 474
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
biog3_v1.0_unigene17990 biogeco3 v1.0 230
AutoFact: Bromodomain-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAK3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: nuclear protein x1 0.0
Putative N-terminus
biog3_v1.0_unigene20872 biogeco3 v1.0 323
AutoFact: Putative methyl-binding domain protein n=1 Tax=Cryptomeria japonica RepID=Q1XG62_CRYJA 1.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: methyl-cpg-binding domain 10 3.65069e-35
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain