Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Zinc finger, TRAF-type

Term: IPR001293  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene274 biogeco3 v1.0 1323
• AutoFact: RWP-RK domain-containing protein [Arabidopsis thaliana] ref|NP_001030895.1| RWP-RK domain-containing protein [Arabidopsis thaliana] sp|Q9M1B0.1|NLP9_ARATH RecName: Full=Protein NLP9; Short=AtNLP9; AltName: Full=NIN-like protein 9; AltName: Full=Nodule inc 9.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene6590 biogeco3 v1.0 559
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: traf type zinc finger domain containing 1 0.0
C-terminus
biog3_v1.0_unigene14776 biogeco3 v1.0 324
• AutoFact: homogentisate solanesyltransferase [Arabidopsis thaliana] ref|NP_001189865.1| homogentisate solanesyltransferase [Arabidopsis thaliana] gb|AAF23211.1|AC016795_24 hypothetical protein [Arabidopsis thaliana] dbj|BAB03105.1| unnamed protein product [Arabidop 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: homogentisate solanesyltransferase 0.0
Internal
biog3_v1.0_unigene14952 biogeco3 v1.0 210
• AutoFact: Unassigned protein
• Blast2go: traf type zinc finger domain containing 1 0.0
unknown
biog3_v1.0_unigene17922 biogeco3 v1.0 217
• AutoFact: RWP-RK domain-containing protein [Arabidopsis thaliana] sp|Q8RWY4.2|NLP6_ARATH RecName: Full=Protein NLP6; Short=AtNLP6; AltName: Full=NIN-like protein 6; AltName: Full=Nodule inception protein-like protein 6 gb|AAN41333.1| unknown protein [Arabidopsis th 6.0e-33
• Blast2go: protein 6.81058e-40
Putative coding
biog3_v1.0_unigene18548 biogeco3 v1.0 198
• AutoFact: Unassigned protein
• FL-Next: tr=Os03g0356652 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: traf type zinc finger domain containing 1 0.0
Putative N-terminus
biog3_v1.0_unigene20117 biogeco3 v1.0 102
• AutoFact: homogentisate solanesyltransferase [Arabidopsis thaliana] ref|NP_001189865.1| homogentisate solanesyltransferase [Arabidopsis thaliana] gb|AAF23211.1|AC016795_24 hypothetical protein [Arabidopsis thaliana] dbj|BAB03105.1| unnamed protein product [Arabidop 1.0e-10
• Blast2go: homogentisate solanesyltransferase 5.8224e-42
unknown
biog3_v1.0_unigene20151 biogeco3 v1.0 295
• AutoFact: homogentisate solanesyltransferase [Arabidopsis thaliana] ref|NP_001189865.1| homogentisate solanesyltransferase [Arabidopsis thaliana] gb|AAF23211.1|AC016795_24 hypothetical protein [Arabidopsis thaliana] dbj|BAB03105.1| unnamed protein product [Arabidop 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: homogentisate solanesyltransferase 0.0
Internal
biog3_v1.0_unigene24869 biogeco3 v1.0 140
• AutoFact: RWP-RK domain-containing protein [Arabidopsis thaliana] ref|NP_001030895.1| RWP-RK domain-containing protein [Arabidopsis thaliana] sp|Q9M1B0.1|NLP9_ARATH RecName: Full=Protein NLP9; Short=AtNLP9; AltName: Full=NIN-like protein 9; AltName: Full=Nodule inc 9.0e-30
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene25035 biogeco3 v1.0 246
• AutoFact: homogentisate solanesyltransferase [Arabidopsis thaliana] ref|NP_001189865.1| homogentisate solanesyltransferase [Arabidopsis thaliana] gb|AAF23211.1|AC016795_24 hypothetical protein [Arabidopsis thaliana] dbj|BAB03105.1| unnamed protein product [Arabidop 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: homogentisate solanesyltransferase 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain