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Assembly Name: biogeco3 v1.0

Name: Transcription factor IIS, N-terminal

Term: IPR017923  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene684 biogeco3 v1.0 878
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gb|AED91455.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 2.99878e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription elongation expressed 0.0
Putative Complete
biog3_v1.0_unigene723 biogeco3 v1.0 753
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: bah and tfiis domain-containing protein 0.0
Internal
biog3_v1.0_unigene1332 biogeco3 v1.0 793
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gb|AEE31438.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein iws1 homolog 0.0
N-terminus
biog3_v1.0_unigene5285 biogeco3 v1.0 391
AutoFact: protein trichome birefringence-like 24 [Arabidopsis thaliana] gb|AAN13062.1| unknown protein [Arabidopsis thaliana] gb|AEE84806.1| protein trichome birefringence-like 24 [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene5697 biogeco3 v1.0 893
AutoFact: putative elongation factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription elongation factor s- 0.0
N-terminus
biog3_v1.0_unigene5919 biogeco3 v1.0 1506
AutoFact: putative elongation factor [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription elongation factor s- 0.0
Putative Complete
biog3_v1.0_unigene6635 biogeco3 v1.0 686
AutoFact: BAH and TFIIS domain-containing protein n=4 Tax=Arabidopsis RepID=F4JCS8_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bah and tfiis domain-containing protein 0.0
Putative C-terminus
biog3_v1.0_unigene7606 biogeco3 v1.0 294
AutoFact: Med26 domain containing protein 5.0e-09
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dna binding 6.72884e-33
Internal
biog3_v1.0_unigene10029 biogeco3 v1.0 1611
AutoFact: protein trichome birefringence-like 24 [Arabidopsis thaliana] gb|AAN13062.1| unknown protein [Arabidopsis thaliana] gb|AEE84806.1| protein trichome birefringence-like 24 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene10230 biogeco3 v1.0 1148
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gb|AEE31438.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein iws1 homolog 0.0
Complete
biog3_v1.0_unigene11130 biogeco3 v1.0 802
AutoFact: protein trichome birefringence-like 25 [Arabidopsis thaliana] gb|AAO42299.1| unknown protein [Arabidopsis thaliana] gb|AAO64043.1| unknown protein [Arabidopsis thaliana] gb|AEE27285.1| protein trichome birefringence-like 25 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene14661 biogeco3 v1.0 202
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gb|AED91455.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 2.99878e-43
Blast2go: transcription elongation expressed 0.0
unknown
biog3_v1.0_unigene16764 biogeco3 v1.0 439
AutoFact: Med26 domain containing protein 2.0e-07
FL-Next: tr=Putative BAH domain-containing protein; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: bah and tfiis domain-containing protein 2.06132e-32
Internal
biog3_v1.0_unigene18606 biogeco3 v1.0 263
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 8.0e-32
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: bah and tfiis domain-containing protein 1.40887e-41
Internal
biog3_v1.0_unigene19156 biogeco3 v1.0 197
AutoFact: BAH and TFIIS domain-containing protein n=4 Tax=Arabidopsis RepID=F4JCS8_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bah and tfiis domain-containing protein 0.0
Putative N-terminus
biog3_v1.0_unigene21717 biogeco3 v1.0 255
AutoFact: protein trichome birefringence-like 25 [Arabidopsis thaliana] gb|AAO42299.1| unknown protein [Arabidopsis thaliana] gb|AAO64043.1| unknown protein [Arabidopsis thaliana] gb|AEE27285.1| protein trichome birefringence-like 25 [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene21907 biogeco3 v1.0 492
AutoFact: BAH and TFIIS domain-containing protein [Arabidopsis thaliana] emb|CAB41133.1| putative protein [Arabidopsis thaliana] gb|AEE78362.1| BAH and TFIIS domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: bah and tfiis domain-containing protein 0.0
Internal
biog3_v1.0_unigene24087 biogeco3 v1.0 192
AutoFact: Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] gb|AEE31438.1| Transcription elongation factor (TFIIS) family protein [Arabidopsis thaliana] 0.0
Blast2go: protein iws1 homolog 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain