Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: ARID/BRIGHT DNA-binding domain

Term: IPR001606  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene1573 biogeco3 v1.0 639
• AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 8.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high mobility group b protein 15-like 0.0
N-terminus
biog3_v1.0_unigene2862 biogeco3 v1.0 369
• AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high mobility group family 0.0
Internal
biog3_v1.0_unigene2921 biogeco3 v1.0 637
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: dna-binding protein 0.0
C-terminus
biog3_v1.0_unigene3804 biogeco3 v1.0 420
• AutoFact: ARID/BRIGHT DNA-binding domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RMF8_PHYPA 9.94922e-44
• Blast2go: protein 7.00649e-45
unknown
biog3_v1.0_unigene4030 biogeco3 v1.0 617
• AutoFact: ARID/BRIGHT DNA-binding domain-containing protein n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7L9D8_ARALL 9.99995e-41
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: arid bright dna-binding domain-containing protein 1.68156e-44
Internal
biog3_v1.0_unigene4381 biogeco3 v1.0 474
• AutoFact: ARID domain containing protein 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high mobility group family 0.0
Internal
biog3_v1.0_unigene4448 biogeco3 v1.0 547
• AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high mobility group family 0.0
N-terminus
biog3_v1.0_unigene8818 biogeco3 v1.0 501
• AutoFact: HMG_box domain containing protein 5.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
biog3_v1.0_unigene9545 biogeco3 v1.0 585
• AutoFact: Unassigned protein
• Blast2go: dna-binding protein 0.0
unknown
biog3_v1.0_unigene10203 biogeco3 v1.0 1036
• AutoFact: ELM2; AT-rich interaction region; Homeodomain-related n=1 Tax=Medicago truncatula RepID=Q2HUC6_MEDTR 4.0e-27
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: dna binding 7.26063e-27
Putative C-terminus
biog3_v1.0_unigene11353 biogeco3 v1.0 1317
• AutoFact: ARID/BRIGHT DNA-binding domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RMF8_PHYPA 9.94922e-44
• FL-Next: tr=ARID/BRIGHT DNA-binding domain-containing protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: protein 7.00649e-45
Internal
biog3_v1.0_unigene14045 biogeco3 v1.0 593
• AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high mobility group family 0.0
Internal
biog3_v1.0_unigene14620 biogeco3 v1.0 131
• AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
• Blast2go: high mobility group family 0.0
unknown
biog3_v1.0_unigene15872 biogeco3 v1.0 308
• AutoFact: pfam00249, Myb_DNA-binding, Myb-like DNA-binding domain 2.0e-05
• Blast2go: dna binding 0.0
Putative coding
biog3_v1.0_unigene20095 biogeco3 v1.0 425
• AutoFact: JmjC domain containing protein 7.0e-36
• FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: jumonji domain protein 0.0
Internal
biog3_v1.0_unigene21845 biogeco3 v1.0 338
• AutoFact: Jumonji domain protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9GWH9_POPTR 0.0
• FL-Next: Isoform 2 of Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 0.0
• Blast2go: lysine-specific demethylase 5d 0.0
Internal
biog3_v1.0_unigene22082 biogeco3 v1.0 263
• AutoFact: ARID/BRIGHT DNA-binding domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RMF8_PHYPA 9.94922e-44
• Blast2go: protein 7.00649e-45
unknown
biog3_v1.0_unigene22438 biogeco3 v1.0 295
• AutoFact: glutathione S-transferase GST 16 - like protein [Oryza sativa Japonica Group] gb|EAZ09947.1| hypothetical protein OsI_32246 [Oryza sativa Indica Group] gb|EAZ45544.1| hypothetical protein OsJ_30204 [Oryza sativa Japonica Group] 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: high mobility group family 1.4013e-45
Internal
biog3_v1.0_unigene23707 biogeco3 v1.0 222
• AutoFact: ARID/BRIGHT DNA-binding domain-containing protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S710_PHYPA 0.0
• Blast2go: arid bright dna-binding domain-containing protein 0.0
unknown
biog3_v1.0_unigene23725 biogeco3 v1.0 216
• AutoFact: ARID/BRIGHT DNA-binding domain-containing protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RMF8_PHYPA 9.94922e-44
• Blast2go: protein 7.00649e-45
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain