Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Ribosomal RNA large subunit methyltransferase RlmN;

Term: IPR004383  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene2937 biogeco3 v1.0 388
• AutoFact: metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] gb|AAK63855.1|AF389282_1 AT5g40270/MSN9_170 [Arabidopsis thaliana] dbj|BAB10908.1| unnamed protein product [Arabidopsis thaliana] gb|AAM26721.1| AT5g40270/MSN9_170 [Arabi 0.0
• FL-Next: tr=Catalytic, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: metal-dependent phosphohydrolase hd domain-containing protein 0.0
Internal
biog3_v1.0_unigene6289 biogeco3 v1.0 596
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAK96886.1| Unknown protein [Arabidopsis thaliana] gb|AAM10038.1| unknown protein [Arabidopsis thaliana] gb|AEE33668.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: radical sam domain-containing protein 0.0
Putative C-terminus
biog3_v1.0_unigene7940 biogeco3 v1.0 394
• AutoFact: metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] gb|AAK63855.1|AF389282_1 AT5g40270/MSN9_170 [Arabidopsis thaliana] dbj|BAB10908.1| unnamed protein product [Arabidopsis thaliana] gb|AAM26721.1| AT5g40270/MSN9_170 [Arabi 0.0
• FL-Next: tr=Putative metal-dependent phosphohydrolase; Phaseolus vulgaris (Kidney bean) (French bean). 0.0
• Blast2go: metal-dependent phosphohydrolase hd domain-containing protein 0.0
Internal
biog3_v1.0_unigene9417 biogeco3 v1.0 1315
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAO41968.1| unknown protein [Arabidopsis thaliana] gb|AAO50541.1| unknown protein [Arabidopsis thaliana] gb|AEE76269.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal rna large subunit methyltransferase n 0.0
Complete
biog3_v1.0_unigene10786 biogeco3 v1.0 441
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAK96886.1| Unknown protein [Arabidopsis thaliana] gb|AAM10038.1| unknown protein [Arabidopsis thaliana] gb|AEE33668.1| radical SAM domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: radical sam domain-containing protein 0.0
Internal
biog3_v1.0_unigene19750 biogeco3 v1.0 267
• AutoFact: metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] gb|AAK63855.1|AF389282_1 AT5g40270/MSN9_170 [Arabidopsis thaliana] dbj|BAB10908.1| unnamed protein product [Arabidopsis thaliana] gb|AAM26721.1| AT5g40270/MSN9_170 [Arabi 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: metal-dependent phosphohydrolase hd domain-containing protein 0.0
Putative C-terminus
biog3_v1.0_unigene20740 biogeco3 v1.0 422
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAL06909.1| At2g39670/F17A14.4 [Arabidopsis thaliana] gb|AAL32891.1| Unknown protein [Arabidopsis thaliana] gb|AAB97122.2| expressed protein [Arabidopsis thaliana] gb|AAN15379.1| Unknown prot 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: radical sam domain-containing protein 0.0
Internal
biog3_v1.0_unigene22123 biogeco3 v1.0 390
• AutoFact: metal-dependent phosphohydrolase HD domain-containing protein [Arabidopsis thaliana] gb|AAK63855.1|AF389282_1 AT5g40270/MSN9_170 [Arabidopsis thaliana] dbj|BAB10908.1| unnamed protein product [Arabidopsis thaliana] gb|AAM26721.1| AT5g40270/MSN9_170 [Arabi 0.0
• FL-Next: tr=Catalytic, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: metal-dependent phosphohydrolase hd domain-containing protein 0.0
Internal
biog3_v1.0_unigene22489 biogeco3 v1.0 255
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAL06909.1| At2g39670/F17A14.4 [Arabidopsis thaliana] gb|AAL32891.1| Unknown protein [Arabidopsis thaliana] gb|AAB97122.2| expressed protein [Arabidopsis thaliana] gb|AAN15379.1| Unknown prot 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: radical sam domain-containing protein 0.0
Internal
biog3_v1.0_unigene25008 biogeco3 v1.0 420
• AutoFact: radical SAM domain-containing protein [Arabidopsis thaliana] gb|AAL06909.1| At2g39670/F17A14.4 [Arabidopsis thaliana] gb|AAL32891.1| Unknown protein [Arabidopsis thaliana] gb|AAB97122.2| expressed protein [Arabidopsis thaliana] gb|AAN15379.1| Unknown prot 0.0
• FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: radical sam domain-containing protein 0.0
Putative N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain