Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Nucleotide binding protein, PINc

Term: IPR006596  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene804 biogeco3 v1.0 409
AutoFact: rRNA-processing protein UTP23, putative n=1 Tax=Ricinus communis RepID=B9SW27_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rrna-processing protein utp23 homolog 0.0
N-terminus
biog3_v1.0_unigene6021 biogeco3 v1.0 1163
AutoFact: exosome complex exonuclease DIS3/RRP44 [Arabidopsis thaliana] gb|AAL09713.1| At2g17510/MJB20.7 [Arabidopsis thaliana] gb|AAL90959.1| At2g17510/MJB20.7 [Arabidopsis thaliana] gb|AAD32908.2| putative mitotic control protein dis3 [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: exosome complex exonuclease dis3 rrp44 0.0
Internal
biog3_v1.0_unigene6928 biogeco3 v1.0 306
AutoFact: rRNA-processing protein UTP23, putative n=1 Tax=Ricinus communis RepID=B9SW27_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rrna-processing protein utp23 homolog 0.0
Putative C-terminus
biog3_v1.0_unigene7621 biogeco3 v1.0 1073
AutoFact: PIN domain-containing protein [Arabidopsis thaliana] gb|AAK32937.1|AF367351_1 At2g46230/T3F17.12 [Arabidopsis thaliana] gb|AAL15401.1| At2g46230/T3F17.12 [Arabidopsis thaliana] gb|AAC62883.2| expressed protein [Arabidopsis thaliana] gb|AEC10662.1| PIN dom 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene13341 biogeco3 v1.0 545
AutoFact: exosome complex exonuclease DIS3/RRP44 [Arabidopsis thaliana] gb|AAL09713.1| At2g17510/MJB20.7 [Arabidopsis thaliana] gb|AAL90959.1| At2g17510/MJB20.7 [Arabidopsis thaliana] gb|AAD32908.2| putative mitotic control protein dis3 [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: exosome complex exonuclease dis3 rrp44 0.0
N-terminus
biog3_v1.0_unigene14238 biogeco3 v1.0 357
AutoFact: forkhead-associated (FHA) domain-containing protein [Arabidopsis thaliana] gb|ACJ23185.1| parallel spindle 1 [Arabidopsis thaliana] gb|AEE31701.1| forkhead-associated (FHA) domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: forkhead-associated domain-containing protein 0.0
Internal
biog3_v1.0_unigene16664 biogeco3 v1.0 275
AutoFact: RNA-binding protein nob1, putative n=1 Tax=Ricinus communis RepID=B9RC94_RICCO 0.0
Blast2go: rna-binding protein nob1 0.0
unknown
biog3_v1.0_unigene17840 biogeco3 v1.0 266
AutoFact: rRNA-processing protein UTP23, putative n=1 Tax=Ricinus communis RepID=B9SW27_RICCO 0.0
Blast2go: rrna-processing protein utp23 homolog 0.0
unknown
biog3_v1.0_unigene18930 biogeco3 v1.0 374
AutoFact: exosome complex exonuclease DIS3/RRP44 [Arabidopsis thaliana] gb|AAL09713.1| At2g17510/MJB20.7 [Arabidopsis thaliana] gb|AAL90959.1| At2g17510/MJB20.7 [Arabidopsis thaliana] gb|AAD32908.2| putative mitotic control protein dis3 [Arabidopsis thaliana] gb|AE 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: exosome complex exonuclease dis3 rrp44 0.0
Internal
biog3_v1.0_unigene19680 biogeco3 v1.0 168
AutoFact: rRNA-processing protein UTP23, putative n=1 Tax=Ricinus communis RepID=B9SW27_RICCO 0.0
Blast2go: rrna-processing protein utp23 homolog 0.0
unknown
biog3_v1.0_unigene23610 biogeco3 v1.0 255
AutoFact: RNA-binding protein NOB1 [Arabidopsis thaliana] dbj|BAB09721.1| unnamed protein product [Arabidopsis thaliana] gb|AED94652.1| RNA-binding protein NOB1 [Arabidopsis thaliana] 0.0
FL-Next: tr=RNA-binding protein nob1, putative; Ricinus communis (Castor bean). 0.0
Blast2go: rna-binding protein nob1 0.0
Internal
biog3_v1.0_unigene25243 biogeco3 v1.0 128
AutoFact: RNA-binding protein nob1, putative n=1 Tax=Ricinus communis RepID=B9RC94_RICCO 0.0
Blast2go: rna-binding protein nob1 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain