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Assembly Name: biogeco3 v1.0

Name: NHL repeat, subgroup

Term: IPR013017  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene1631 biogeco3 v1.0 267
• AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AEE35041.1| NHL domain-containing protein [Arabidopsis thaliana] 0.0
• Blast2go: nhl repeat-containing protein 0.0
unknown
biog3_v1.0_unigene3343 biogeco3 v1.0 1499
• AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AEE35041.1| NHL domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nhl repeat-containing protein 0.0
Putative Complete
biog3_v1.0_unigene3466 biogeco3 v1.0 901
• AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AAM13055.1| unknown protein [Arabidopsis thaliana] gb|AAN72090.1| unknown protein [Arabidopsis thaliana] gb|AEE75577.1| NHL domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: nhl domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene6547 biogeco3 v1.0 445
• AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AAL06517.1|AF412064_1 At1g23890/T23E23_13 [Arabidopsis thaliana] gb|AAL31179.1| At1g23890/T23E23_13 [Arabidopsis thaliana] dbj|BAE99208.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30447.1| N 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nhl domain-containing protein 0.0
Internal
biog3_v1.0_unigene11342 biogeco3 v1.0 640
• AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AAL06517.1|AF412064_1 At1g23890/T23E23_13 [Arabidopsis thaliana] gb|AAL31179.1| At1g23890/T23E23_13 [Arabidopsis thaliana] dbj|BAE99208.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30447.1| N 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nhl domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene15566 biogeco3 v1.0 219
• AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AEE35041.1| NHL domain-containing protein [Arabidopsis thaliana] 0.0
• Blast2go: nhl repeat-containing protein 0.0
unknown
biog3_v1.0_unigene18020 biogeco3 v1.0 267
• AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AEE35041.1| NHL domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: nhl repeat-containing protein 0.0
C-terminus
biog3_v1.0_unigene18382 biogeco3 v1.0 203
• AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AAL06517.1|AF412064_1 At1g23890/T23E23_13 [Arabidopsis thaliana] gb|AAL31179.1| At1g23890/T23E23_13 [Arabidopsis thaliana] dbj|BAE99208.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30447.1| N 0.0
• Blast2go: nhl domain-containing protein 0.0
unknown
biog3_v1.0_unigene21814 biogeco3 v1.0 436
• AutoFact: haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] gb|AAL38840.1| unknown protein [Arabidopsis thaliana] gb|AEE33400.1| haloacid dehalogenase-like hydrolase domain-containing protein [Arabidopsis thaliana] 1.0e-20
• Blast2go: protein 9.19457e-25
Putative coding
biog3_v1.0_unigene24103 biogeco3 v1.0 354
• AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AAM13055.1| unknown protein [Arabidopsis thaliana] gb|AAN72090.1| unknown protein [Arabidopsis thaliana] gb|AEE75577.1| NHL domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nhl domain-containing protein 0.0
Internal
biog3_v1.0_unigene24859 biogeco3 v1.0 730
• AutoFact: NHL domain-containing protein [Arabidopsis thaliana] gb|AEE35041.1| NHL domain-containing protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nhl repeat-containing protein 0.0
Putative Complete

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain