Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: Uncharacterised protein family Ycf19

Term: IPR003425  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene2537 biogeco3 v1.0 321
• AutoFact: PREDICTED: histone deacetylase 6-like isoform 8 [Macaca mulatta] 5.0e-22
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: histone deacetylase 0.0
N-terminus
biog3_v1.0_unigene3309 biogeco3 v1.0 771
• AutoFact: YGGT family protein [Arabidopsis thaliana] emb|CAC34485.1| putative protein [Arabidopsis thaliana] dbj|BAC43053.1| unknown protein [Arabidopsis thaliana] gb|AAO63329.1| At5g21920 [Arabidopsis thaliana] gb|AAO73904.1| expressed protein [Arabidopsis thalian 9.00054e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: yggt family protein 0.0
Putative Complete
biog3_v1.0_unigene6769 biogeco3 v1.0 545
• AutoFact: cofactor assembly, complex C (B6F) [Arabidopsis thaliana] gb|AAM12992.1| putative protein [Arabidopsis thaliana] gb|AAM47922.1| putative protein [Arabidopsis thaliana] dbj|BAD94460.1| hypothetical protein [Arabidopsis thaliana] gb|AED94046.1| cofactor ass 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene11671 biogeco3 v1.0 940
• AutoFact: YGGT family protein [Arabidopsis thaliana] emb|CAB36768.1| putative protein [Arabidopsis thaliana] emb|CAB79601.1| putative protein [Arabidopsis thaliana] dbj|BAE98662.1| hypothetical protein [Arabidopsis thaliana] gb|AEE85417.1| YGGT family protein [Arab 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: yggt family protein 0.0
C-terminus
biog3_v1.0_unigene13689 biogeco3 v1.0 289
• AutoFact: YGGT family protein [Arabidopsis thaliana] emb|CAC34485.1| putative protein [Arabidopsis thaliana] dbj|BAC43053.1| unknown protein [Arabidopsis thaliana] gb|AAO63329.1| At5g21920 [Arabidopsis thaliana] gb|AAO73904.1| expressed protein [Arabidopsis thalian 9.00054e-42
• Blast2go: yggt family protein 0.0
unknown
biog3_v1.0_unigene13817 biogeco3 v1.0 310
• AutoFact: PREDICTED: histone deacetylase 6-like isoform 8 [Macaca mulatta] 5.0e-22
• Blast2go: histone deacetylase 0.0
unknown
biog3_v1.0_unigene22112 biogeco3 v1.0 229
• AutoFact: cofactor assembly, complex C (B6F) [Arabidopsis thaliana] gb|AAM12992.1| putative protein [Arabidopsis thaliana] gb|AAM47922.1| putative protein [Arabidopsis thaliana] dbj|BAD94460.1| hypothetical protein [Arabidopsis thaliana] gb|AED94046.1| cofactor ass 8.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain