Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: SWIB/MDM2 domain

Term: IPR003121  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene5993 biogeco3 v1.0 2029
AutoFact: SWI/SNF complex component SNF12 homolog n=2 Tax=Arabidopsis RepID=SNF12_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chromatin remodeling complex subunit 0.0
Complete
biog3_v1.0_unigene7354 biogeco3 v1.0 561
AutoFact: SWIb domain-containing protein [Solanum chacoense] 2.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib mdm2 domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene10388 biogeco3 v1.0 299
AutoFact: Upstream activation factor subunit UAF30, putative n=1 Tax=Ricinus communis RepID=B9S8L0_RICCO 4.0e-37
Blast2go: swib mdm2 domain containing protein 1.26117e-44
unknown
biog3_v1.0_unigene11232 biogeco3 v1.0 603
AutoFact: SWIb domain-containing protein [Solanum chacoense] 9.0e-26
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene11797 biogeco3 v1.0 1062
AutoFact: Upstream activation factor subunit UAF30, putative n=1 Tax=Ricinus communis RepID=B9S8L0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib mdm2 domain containing protein 0.0
C-terminus
biog3_v1.0_unigene14826 biogeco3 v1.0 255
AutoFact: SWIb domain-containing protein [Solanum chacoense] 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene22420 biogeco3 v1.0 90
AutoFact: SWIb domain-containing protein [Solanum chacoense] 9.0e-26
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene23466 biogeco3 v1.0 276
AutoFact: SWIB/MDM2 and Plus-3 and GYF domain-containing protein [Arabidopsis thaliana] sp|Q9FT92.2|Y5843_ARATH RecName: Full=Uncharacterized protein At5g08430 gb|ACF06124.1| At5g08430 [Arabidopsis thaliana] gb|AED91300.1| SWIB/MDM2 and Plus-3 and GYF domain-contai 1.0e-31
FL-Next: sp=Zinc finger CCCH domain-containing protein 44; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: zinc finger ccch domain-containing protein 44-like 0.0
Internal
biog3_v1.0_unigene24011 biogeco3 v1.0 306
AutoFact: SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] ref|NP_001119064.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] emb|CAB36527.1| putative protein [Arabidopsis thaliana] emb|CAB79536.1| putative protein [Arabidopsis thaliana] gb|AA 9.0e-20
Blast2go: swib domain-containing protein 5.49429e-24
unknown
biog3_v1.0_unigene24497 biogeco3 v1.0 332
AutoFact: SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] ref|NP_001119064.1| SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] emb|CAB36527.1| putative protein [Arabidopsis thaliana] emb|CAB79536.1| putative protein [Arabidopsis thaliana] gb|AA 8.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swib domain-containing protein 1.17292e-27
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain