Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Zinc finger, U1-C type

Term: IPR013085  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1943 biogeco3 v1.0 1178
AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 1.99965e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: c-type u1 snrnp 0.0
Complete
biog3_v1.0_unigene2075 biogeco3 v1.0 473
AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u1 small nuclear ribonucleoprotein 0.0
Putative C-terminus
biog3_v1.0_unigene10276 biogeco3 v1.0 272
AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u1 small nuclear ribonucleoprotein 0.0
Putative N-terminus
biog3_v1.0_unigene18480 biogeco3 v1.0 191
AutoFact: Nucleic acid binding protein n=3 Tax=Andropogoneae RepID=B6U4V4_MAIZE 1.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleic acid binding protein 0.0
N-terminus
biog3_v1.0_unigene18620 biogeco3 v1.0 124
AutoFact: PREDICTED: similar to putative C-type U1 snRNP n=1 Tax=Vitis vinifera RepID=UPI00019837D4 1.99965e-42
Blast2go: c-type u1 snrnp 0.0
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain