Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Splicing factor PWI

Term: IPR002483  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene442 biogeco3 v1.0 594
AutoFact: copper ion binding protein, putative; K13171 serine/arginine repetitive matrix protein 1 1.0e-06
Blast2go: protein 4.95543e-08
Coding
biog3_v1.0_unigene5529 biogeco3 v1.0 638
AutoFact: putative transformer serine/arginine-rich ribonucleoprotein [Oryza sativa Japonica Group] gb|EAZ26366.1| hypothetical protein OsJ_10248 [Oryza sativa Japonica Group] 2.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 1.42718e-37
Putative C-terminus
biog3_v1.0_unigene7085 biogeco3 v1.0 875
AutoFact: pre-mRNA splicing factor domain-containing protein [Arabidopsis thaliana] gb|AAC16071.1| expressed protein [Arabidopsis thaliana] gb|AAK74011.1| At2g44200/F6E13.34 [Arabidopsis thaliana] gb|AAM14905.1| expressed protein [Arabidopsis thaliana] gb|AAM47345. 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna splicing factor domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene11338 biogeco3 v1.0 919
AutoFact: putative transformer serine/arginine-rich ribonucleoprotein [Oryza sativa Japonica Group] gb|EAZ26366.1| hypothetical protein OsJ_10248 [Oryza sativa Japonica Group] 2.0e-28
Blast2go: protein 1.42718e-37
Coding
biog3_v1.0_unigene21186 biogeco3 v1.0 254
AutoFact: putative transformer serine/arginine-rich ribonucleoprotein [Oryza sativa Japonica Group] gb|EAZ26366.1| hypothetical protein OsJ_10248 [Oryza sativa Japonica Group] 7.00005e-41
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene22975 biogeco3 v1.0 260
AutoFact: putative RNA-binding region RNP-1 and Splicing factor PWI family member protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein 0.0
Putative N-terminus
biog3_v1.0_unigene23212 biogeco3 v1.0 199
AutoFact: copper ion binding protein, putative; K13171 serine/arginine repetitive matrix protein 1 1.0e-06
Blast2go: protein 4.95543e-08
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain