Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: RNA-dependent RNA polymerase, eukaryotic-type

Term: IPR007855  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene989 biogeco3 v1.0 457
• AutoFact: putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana] 0.0
• FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: rna-dependent rna polymerase 6 0.0
Internal
biog3_v1.0_unigene2215 biogeco3 v1.0 491
• AutoFact: RNA-directed RNA polymerase, putative n=1 Tax=Solanum demissum RepID=Q6L3W8_SOLDE 0.0
• FL-Next: sp=Probable RNA-dependent RNA polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: rna-dependent rna polymerase 0.0
C-terminus
biog3_v1.0_unigene9473 biogeco3 v1.0 296
• AutoFact: golgin candidate 1 [Arabidopsis thaliana] sp|Q8S8N9.2|GOGC1_ARATH RecName: Full=Golgin candidate 1; Short=AtGC1; AltName: Full=Golgin-84 gb|AAS49041.1| At2g19950 [Arabidopsis thaliana] dbj|BAF01318.1| hypothetical protein [Arabidopsis thaliana] gb|AEC0694 0.0
• FL-Next: sp=Golgin-84; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: golgin candidate 1 0.0
Internal
biog3_v1.0_unigene10619 biogeco3 v1.0 976
• AutoFact: RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis RepID=B9RP51_RICCO 0.0
• FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna-dependent rna polymerase 6 0.0
C-terminus
biog3_v1.0_unigene15346 biogeco3 v1.0 484
• AutoFact: RNA-directed RNA Polymerase (Fragment) n=1 Tax=Vigna unguiculata RepID=Q75ZN6_VIGUN 6.0e-26
• FL-Next: sp=Probable RNA-dependent RNA polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: rna-dependent rna polymerase 2.78958e-38
C-terminus
biog3_v1.0_unigene16010 biogeco3 v1.0 321
• AutoFact: putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana] 0.0
• FL-Next: sp=RNA-dependent RNA polymerase 6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna-dependent rna polymerase 6 0.0
Internal
biog3_v1.0_unigene20380 biogeco3 v1.0 216
• AutoFact: Rna-dependent RNA polymerase n=1 Tax=Populus trichocarpa RepID=B9IKW9_POPTR 0.0
• FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: rna-dependent rna polymerase 6 0.0
Internal
biog3_v1.0_unigene20772 biogeco3 v1.0 329
• AutoFact: RNA-directed RNA polymerase (Fragment) n=1 Tax=Petunia x hybrida RepID=Q9ZRX3_PETHY 3.0e-39
• FL-Next: sp=RNA-dependent RNA polymerase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna-directed rna polymerase 2.8026e-45
Internal
biog3_v1.0_unigene23818 biogeco3 v1.0 169
• AutoFact: RNA-dependent RNA polymerase, putative n=1 Tax=Ricinus communis RepID=B9RP51_RICCO 0.0
• FL-Next: sp=Probable RNA-dependent RNA polymerase SHL2; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: rna-dependent rna polymerase 6 0.0
Internal
biog3_v1.0_unigene25337 biogeco3 v1.0 223
• AutoFact: RNA-directed RNA polymerase [Petunia x hybrida] 3.0e-30
• FL-Next: sp=Probable RNA-dependent RNA polymerase 1; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: rna-dependent rna polymerase 5.91655e-32
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain