Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Pre-mRNA-splicing factor 38

Term: IPR005037  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene4531 biogeco3 v1.0 439
AutoFact: sarcoplasmic reticulum protein-like protein [Oryza sativa Japonica Group] gb|AAS07364.1| sarcoplasmic reticulum protein (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF99835.1| RNA-binding protein Luc7-like 2, putative, expressed [Oryza sa 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein luc7-like expressed 0.0
Internal
biog3_v1.0_unigene6158 biogeco3 v1.0 1313
AutoFact: pre-mRNA processing factor [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor 38a 0.0
N-terminus
biog3_v1.0_unigene10672 biogeco3 v1.0 2326
AutoFact: RecName: Full=Splicing factor U2af large subunit B; AltName: Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa subunit B; AltName: Full=U2 small nuclear ribonucleoprotein auxiliary factor large subunit B; Short=U2 snRNP auxiliary factor large subun 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene13104 biogeco3 v1.0 534
AutoFact: sarcoplasmic reticulum protein-like protein [Oryza sativa Japonica Group] gb|AAS07364.1| sarcoplasmic reticulum protein (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF99835.1| RNA-binding protein Luc7-like 2, putative, expressed [Oryza sa 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein luc7-like expressed 0.0
Putative C-terminus
biog3_v1.0_unigene15759 biogeco3 v1.0 203
AutoFact: PRP38 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: pre-mrna-splicing factor 38b 0.0
Internal
biog3_v1.0_unigene17187 biogeco3 v1.0 180
AutoFact: pre-mRNA processing factor [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor 38a 0.0
Internal
biog3_v1.0_unigene20719 biogeco3 v1.0 211
AutoFact: PRP38 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: pre-mrna-splicing factor 38b 0.0
Internal
biog3_v1.0_unigene22760 biogeco3 v1.0 343
AutoFact: sarcoplasmic reticulum protein-like protein [Oryza sativa Japonica Group] gb|AAS07364.1| sarcoplasmic reticulum protein (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF99835.1| RNA-binding protein Luc7-like 2, putative, expressed [Oryza sa 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein luc7-like expressed 0.0
N-terminus
biog3_v1.0_unigene24752 biogeco3 v1.0 226
AutoFact: sarcoplasmic reticulum protein-like protein [Oryza sativa Japonica Group] gb|AAS07364.1| sarcoplasmic reticulum protein (with alternative splicing) [Oryza sativa Japonica Group] gb|ABF99835.1| RNA-binding protein Luc7-like 2, putative, expressed [Oryza sa 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna-binding protein luc7-like expressed 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain