Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Uncharacterised domain CHP00451

Term: IPR004521  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene404 biogeco3 v1.0 116
AutoFact: rRNA intron-encoded homing endonuclease [Oryza sativa] 7.0e-17
Blast2go: rrna intron-encoded homing endonuclease 0.0
Putative ncRNA
biog3_v1.0_unigene4362 biogeco3 v1.0 368
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: eukaryotic translation initiation factor 2d-like 6.44037e-14
C-terminus
biog3_v1.0_unigene5749 biogeco3 v1.0 616
AutoFact: eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] dbj|BAE99137.1| hypothetical protein [Arabidopsis thaliana] gb|AEE35192.1| eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Eukaryotic translation initiation factor SUI1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: eukaryotic translation initiation factor 2d-like 0.0
Internal
biog3_v1.0_unigene6029 biogeco3 v1.0 1352
AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] sp|Q9LD90.1|DKC1_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=Nopp-140-associated protein of 57 kDa homolog; Short=AtNAP57; AltName: Full=Nucleolar protein NA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene9179 biogeco3 v1.0 724
AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mct-1 like pua rna binding-domain containing protein 0.0
C-terminus
biog3_v1.0_unigene14302 biogeco3 v1.0 204
AutoFact: rRNA intron-encoded homing endonuclease [Oryza sativa] 7.0e-17
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: rrna intron-encoded homing endonuclease 0.0
Putative Complete
biog3_v1.0_unigene17337 biogeco3 v1.0 54
AutoFact: rRNA intron-encoded homing endonuclease [Oryza sativa] 7.0e-17
Blast2go: rrna intron-encoded homing endonuclease 0.0
unknown
biog3_v1.0_unigene18287 biogeco3 v1.0 298
AutoFact: Unassigned protein
Blast2go: eukaryotic translation initiation factor 2d-like 6.44037e-14
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain