Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Ribosomal protein L6

Term: IPR000702  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1957 biogeco3 v1.0 738
AutoFact: putative Fip1 motif containing protein [Oryza sativa Japonica Group] gb|ABF98630.1| Fip1 motif family protein, expressed [Oryza sativa Japonica Group] gb|ABF98631.1| Fip1 motif family protein, expressed [Oryza sativa Japonica Group] 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: atp binding 0.0
Internal
biog3_v1.0_unigene2603 biogeco3 v1.0 714
AutoFact: 60S ribosomal protein L9-1 [Arabidopsis thaliana] ref|NP_564418.1| 60S ribosomal protein L9-1 [Arabidopsis thaliana] sp|P49209.3|RL91_ARATH RecName: Full=60S ribosomal protein L9-1 gb|AAF97345.1|AC021045_2 Putative 60S ribosomal protein L9 [Arabidopsis th 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l9 0.0
Putative Complete
biog3_v1.0_unigene3130 biogeco3 v1.0 374
AutoFact: large subunit ribosomal protein L6 [Arabidopsis thaliana] gb|AAK73258.1| putative ribosomal protein L6 [Arabidopsis thaliana] gb|AAD15497.2| putative ribosomal protein L6 [Arabidopsis thaliana] gb|AAM66004.1| putative ribosomal protein L6 [Arabidopsis tha 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l6 0.0
N-terminus
biog3_v1.0_unigene5519 biogeco3 v1.0 1083
AutoFact: putative 60S ribosomal protein L9 [Oryza sativa Japonica Group] gb|EEC72297.1| hypothetical protein OsI_05474 [Oryza sativa Indica Group] gb|EEE56134.1| hypothetical protein OsJ_05010 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l9 0.0
Complete
biog3_v1.0_unigene11226 biogeco3 v1.0 773
AutoFact: 50S ribosomal protein L6 [Arabidopsis thaliana] sp|O23049.1|RK6_ARATH RecName: Full=50S ribosomal protein L6, chloroplastic; AltName: Full=Protein EMBRYO DEFECTIVE 2394; Flags: Precursor pdb|3BBO|I Chain I, Homology Model For The Spinach Chloroplast 50s S 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l6 0.0
Complete
biog3_v1.0_unigene14728 biogeco3 v1.0 359
AutoFact: putative Fip1 motif containing protein [Oryza sativa Japonica Group] gb|ABF98630.1| Fip1 motif family protein, expressed [Oryza sativa Japonica Group] gb|ABF98631.1| Fip1 motif family protein, expressed [Oryza sativa Japonica Group] 4.99983e-42
Blast2go: atp binding 0.0
Coding
biog3_v1.0_unigene19004 biogeco3 v1.0 444
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBX9_RICCO 6.0e-22
FL-Next: tr=ATP binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: atp binding 1.178e-21
Internal
biog3_v1.0_unigene25031 biogeco3 v1.0 305
AutoFact: large subunit ribosomal protein L6 [Arabidopsis thaliana] gb|AAK73258.1| putative ribosomal protein L6 [Arabidopsis thaliana] gb|AAD15497.2| putative ribosomal protein L6 [Arabidopsis thaliana] gb|AAM66004.1| putative ribosomal protein L6 [Arabidopsis tha 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l6 0.0
C-terminus
biog3_v1.0_unigene26036 biogeco3 v1.0 145
AutoFact: 60S ribosomal protein L9-1 [Arabidopsis thaliana] ref|NP_564418.1| 60S ribosomal protein L9-1 [Arabidopsis thaliana] sp|P49209.3|RL91_ARATH RecName: Full=60S ribosomal protein L9-1 gb|AAF97345.1|AC021045_2 Putative 60S ribosomal protein L9 [Arabidopsis th 0.0
Blast2go: 60s ribosomal protein l9 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain