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Assembly Name: biogeco3 v1.0

Name: Single-stranded DNA-binding protein, SSDP

Term: IPR007591  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene4029 biogeco3 v1.0 542
AutoFact: pfam00400, WD40, WD domain, G-beta repeat 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Internal
biog3_v1.0_unigene5954 biogeco3 v1.0 1315
AutoFact: pfam00400, WD40, WD domain, G-beta repeat 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Putative Complete
biog3_v1.0_unigene7326 biogeco3 v1.0 661
AutoFact: Transcriptional corepressor LEUNIG n=1 Tax=Arabidopsis thaliana RepID=F4JUD2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Putative C-terminus
biog3_v1.0_unigene8143 biogeco3 v1.0 282
AutoFact: pfam00400, WD40, WD domain, G-beta repeat 3.0e-07
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Internal
biog3_v1.0_unigene15207 biogeco3 v1.0 394
AutoFact: STYLOSA protein n=1 Tax=Antirrhinum majus RepID=Q6H976_ANTMA 5.0e-38
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional corepressor leunig-like isoform 2 2.56438e-43
Internal
biog3_v1.0_unigene15448 biogeco3 v1.0 289
AutoFact: Transcriptional corepressor LEUNIG n=1 Tax=Arabidopsis thaliana RepID=F4JUD2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Internal
biog3_v1.0_unigene15706 biogeco3 v1.0 259
AutoFact: Transcriptional corepressor LEUNIG n=1 Tax=Arabidopsis thaliana RepID=F4JUD2_ARATH 0.0
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Internal
biog3_v1.0_unigene20246 biogeco3 v1.0 300
AutoFact: LisH domain containing protein 1.0e-06
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional corepressor leunig-like isoform 1 8.60696e-21
N-terminus
biog3_v1.0_unigene21654 biogeco3 v1.0 354
AutoFact: STYLOSA protein n=1 Tax=Antirrhinum majus RepID=Q6H976_ANTMA 0.0
FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Internal
biog3_v1.0_unigene24141 biogeco3 v1.0 368
AutoFact: pfam00400, WD40, WD domain, G-beta repeat 3.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcriptional corepressor leunig 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain