Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Hemimethylated DNA-binding domain

Term: IPR011722  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2279 biogeco3 v1.0 233
AutoFact: Unassigned protein
Blast2go: unknown [Picea sitchensis] 4.09715e-14
unknown
biog3_v1.0_unigene2693 biogeco3 v1.0 656
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290 gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at1g11290-like 0.0
C-terminus
biog3_v1.0_unigene6264 biogeco3 v1.0 431
AutoFact: pfam08755, YccV-like, Hemimethylated DNA-binding protein YccV like 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uvrb uvrc motif-containing protein 0.0
Internal
biog3_v1.0_unigene7896 biogeco3 v1.0 748
AutoFact: pfam08755, YccV-like, Hemimethylated DNA-binding protein YccV like 5.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uvrb uvrc motif-containing protein 0.0
C-terminus
biog3_v1.0_unigene20765 biogeco3 v1.0 298
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 6.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing 0.0
Internal
biog3_v1.0_unigene22925 biogeco3 v1.0 412
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein At3g23330 dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana] gb|AEE76753.1| pentatric 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene22985 biogeco3 v1.0 196
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290 gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at1g11290-like 0.0
N-terminus
biog3_v1.0_unigene26194 biogeco3 v1.0 280
AutoFact: PPR domain containing protein 7.0e-06
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g59720-like protein 1.96182e-44
Internal
biog3_v1.0_unigene26378 biogeco3 v1.0 275
AutoFact: putative pentatricopeptide (PPR) repeat-containing protein [Oryza sativa Japonica Group] 2.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 3.45555e-29
N-terminus
biog3_v1.0_unigene26405 biogeco3 v1.0 392
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290 gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at1g11290-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain