Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Ribosomal protein L1, 2-layer alpha/beta-sandwich

Term: IPR016094  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene809 biogeco3 v1.0 2414
• AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAK96649.1| T5E21.14/T5E21.14 [Arabidopsis thaliana] gb|AAM16222.1| At1g14670/T5E21.14 [Arabidopsis thaliana] gb|AEE29200.1| putative endomembrane protein 70 [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transmembrane 9 superfamily protein member 1 precursor 0.0
Complete
biog3_v1.0_unigene4308 biogeco3 v1.0 1142
• AutoFact: putative endomembrane protein 70 [Arabidopsis thaliana] gb|AAD20090.1| putative endosomal protein [Arabidopsis thaliana] gb|AAL24256.1| At2g01970/F14H20.4 [Arabidopsis thaliana] dbj|BAE98629.1| putative endosomal protein [Arabidopsis thaliana] gb|AEC05528 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transmembrane 9 superfamily protein member 1 precursor 0.0
Complete
biog3_v1.0_unigene8074 biogeco3 v1.0 1132
• AutoFact: Ribosomal protein n=1 Tax=Picea sitchensis RepID=A9P244_PICSI 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 50s ribosomal protein l1 0.0
N-terminus
biog3_v1.0_unigene8454 biogeco3 v1.0 437
• AutoFact: Ribosomal protein n=8 Tax=Spermatophyta RepID=B7F9R7_ORYSJ 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l10a-1 0.0
C-terminus
biog3_v1.0_unigene10821 biogeco3 v1.0 538
• AutoFact: Ribosomal protein n=8 Tax=Spermatophyta RepID=B7F9R7_ORYSJ 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l10a-1 0.0
N-terminus
biog3_v1.0_unigene10839 biogeco3 v1.0 408
• AutoFact: 50S ribosomal protein L1 n=1 Tax=Zea mays RepID=B6TB66_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: 50s ribosomal protein l1 0.0
Internal
biog3_v1.0_unigene13146 biogeco3 v1.0 227
• AutoFact: Ribosomal protein n=1 Tax=Picea sitchensis RepID=A9P244_PICSI 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 50s ribosomal protein l1 0.0
C-terminus
biog3_v1.0_unigene20951 biogeco3 v1.0 242
• AutoFact: Ribosomal protein n=8 Tax=Spermatophyta RepID=B7F9R7_ORYSJ 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein l10a-1 0.0
Internal
biog3_v1.0_unigene25136 biogeco3 v1.0 59
• AutoFact: Ribosomal protein n=1 Tax=Picea sitchensis RepID=A9P244_PICSI 0.0
• FL-Next: sp=Ribosomal protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 50s ribosomal protein l1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain