Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: PDZ domain

Term: IPR001478  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene432 biogeco3 v1.0 297
AutoFact: Serine protease htra2, putative n=1 Tax=Ricinus communis RepID=B9RF97_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like 14-like 0.0
Internal
biog3_v1.0_unigene1965 biogeco3 v1.0 825
AutoFact: protease Do-like 10 [Arabidopsis thaliana] sp|Q9FIV6.1|DGP10_ARATH RecName: Full=Protease Do-like 10, mitochondrial; Flags: Precursor dbj|BAB11638.1| serine protease-like protein [Arabidopsis thaliana] gb|AAL47441.1| AT5g36950/MLF18_70 [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like mitochondrial-like 0.0
Putative N-terminus
biog3_v1.0_unigene2130 biogeco3 v1.0 402
AutoFact: 26S proteasome non-ATPase regulatory subunit 9 [Arabidopsis thaliana] gb|AAM65312.1| 26S proteasome regulatory subunit p27, putative [Arabidopsis thaliana] dbj|BAC43064.1| unknown protein [Arabidopsis thaliana] gb|AAO63310.1| At5g57950 [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Medicago truncatula (Barrel medic) (Medicago tribuloides). 0.0
Blast2go: 26s proteasome non-atpase regulatory subunit 9 0.0
C-terminus
biog3_v1.0_unigene2455 biogeco3 v1.0 808
AutoFact: protease Do-like 2 [Arabidopsis thaliana] sp|O82261.2|DEGP2_ARATH RecName: Full=Protease Do-like 2, chloroplastic; Flags: Precursor gb|AAG41447.1|AF326865_1 putative DegP2 protease [Arabidopsis thaliana] gb|AAK14061.1|AF245171_1 DegP2 protease [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like chloroplastic-like 0.0
Complete
biog3_v1.0_unigene2614 biogeco3 v1.0 711
AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 0.0
FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 7-like 0.0
Internal
biog3_v1.0_unigene3102 biogeco3 v1.0 489
AutoFact: protease Do-like 10 [Arabidopsis thaliana] sp|Q9FIV6.1|DGP10_ARATH RecName: Full=Protease Do-like 10, mitochondrial; Flags: Precursor dbj|BAB11638.1| serine protease-like protein [Arabidopsis thaliana] gb|AAL47441.1| AT5g36950/MLF18_70 [Arabidopsis thalia 0.0
FL-Next: sp=Protease Do-like 10, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like mitochondrial-like 0.0
Internal
biog3_v1.0_unigene3165 biogeco3 v1.0 705
AutoFact: carboxyl terminal protease-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidase s41 family protein 0.0
N-terminus
biog3_v1.0_unigene3940 biogeco3 v1.0 375
AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 0.0
FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 7-like 0.0
C-terminus
biog3_v1.0_unigene4110 biogeco3 v1.0 299
AutoFact: protease Do-like 2 [Arabidopsis thaliana] sp|O82261.2|DEGP2_ARATH RecName: Full=Protease Do-like 2, chloroplastic; Flags: Precursor gb|AAG41447.1|AF326865_1 putative DegP2 protease [Arabidopsis thaliana] gb|AAK14061.1|AF245171_1 DegP2 protease [Arabidopsi 0.0
FL-Next: sp=Protease Do-like 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like chloroplastic-like 0.0
Internal
biog3_v1.0_unigene4947 biogeco3 v1.0 398
AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 0.0
FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 7-like 0.0
Internal
biog3_v1.0_unigene5096 biogeco3 v1.0 381
AutoFact: rubredoxin family protein [Arabidopsis thaliana] dbj|BAB10504.1| unnamed protein product [Arabidopsis thaliana] gb|AAK59624.1| unknown protein [Arabidopsis thaliana] gb|AAN41384.1| unknown protein [Arabidopsis thaliana] gb|AED92391.1| rubredoxin family pr 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene5624 biogeco3 v1.0 231
AutoFact: carboxyl terminal protease-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidase s41 family protein 0.0
Internal
biog3_v1.0_unigene5644 biogeco3 v1.0 758
AutoFact: D1 protease-like protein precursor [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: carboxyl-terminal-processing protease 0.0
Internal
biog3_v1.0_unigene5710 biogeco3 v1.0 2607
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Protease Do-like 9; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 9-like 0.0
Complete
biog3_v1.0_unigene6354 biogeco3 v1.0 915
AutoFact: PREDICTED: similar to membrane-associated zinc metalloprotease, putative isoform 1 n=1 Tax=Vitis vinifera RepID=UPI0001984454 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine protease 0.0
Internal
biog3_v1.0_unigene6690 biogeco3 v1.0 614
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein like sex4 1 0.0
Internal
biog3_v1.0_unigene7611 biogeco3 v1.0 1014
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO 0.0
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene7655 biogeco3 v1.0 345
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T3Z6_RICCO 0.0
FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 7-like 0.0
Internal
biog3_v1.0_unigene9676 biogeco3 v1.0 1067
AutoFact: Protease degQ, putative n=1 Tax=Ricinus communis RepID=B9SF71_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine-type peptidase 0.0
Putative C-terminus
biog3_v1.0_unigene12295 biogeco3 v1.0 374
AutoFact: Peptidase M50-like protein n=3 Tax=Arabidopsis RepID=O23053_ARATH 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine protease 1.95341e-42
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain