Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: PDZ domain

Term: IPR001478  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene13454 biogeco3 v1.0 1760
AutoFact: putative DegP2 protease [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protease do-like 9-like 0.0
Putative Complete
biog3_v1.0_unigene14943 biogeco3 v1.0 485
AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 0.0
FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene16494 biogeco3 v1.0 310
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene17281 biogeco3 v1.0 211
AutoFact: Protease degQ, putative n=1 Tax=Ricinus communis RepID=B9SF71_RICCO 0.0
Blast2go: serine-type peptidase 0.0
unknown
biog3_v1.0_unigene17847 biogeco3 v1.0 288
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9SBN7_RICCO 0.0
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rna binding 0.0
Internal
biog3_v1.0_unigene17872 biogeco3 v1.0 320
AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 0.0
FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 7-like 0.0
Internal
biog3_v1.0_unigene18588 biogeco3 v1.0 195
AutoFact: Serine protease htra2, putative n=1 Tax=Ricinus communis RepID=B9RF97_RICCO 0.0
Blast2go: protease do-like 14-like 0.0
unknown
biog3_v1.0_unigene18881 biogeco3 v1.0 292
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T3Z6_RICCO 0.0
FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 7-like 0.0
Internal
biog3_v1.0_unigene19049 biogeco3 v1.0 224
AutoFact: protease Do-like 2 [Arabidopsis thaliana] sp|O82261.2|DEGP2_ARATH RecName: Full=Protease Do-like 2, chloroplastic; Flags: Precursor gb|AAG41447.1|AF326865_1 putative DegP2 protease [Arabidopsis thaliana] gb|AAK14061.1|AF245171_1 DegP2 protease [Arabidopsi 0.0
FL-Next: sp=Protease Do-like 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like chloroplastic-like 0.0
Internal
biog3_v1.0_unigene19384 biogeco3 v1.0 241
AutoFact: 26S proteasome non-ATPase regulatory subunit 9 [Arabidopsis thaliana] gb|AAM65312.1| 26S proteasome regulatory subunit p27, putative [Arabidopsis thaliana] dbj|BAC43064.1| unknown protein [Arabidopsis thaliana] gb|AAO63310.1| At5g57950 [Arabidopsis thalia 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: 26s proteasome non-atpase regulatory subunit 9 0.0
N-terminus
biog3_v1.0_unigene19441 biogeco3 v1.0 290
AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 9.00054e-42
FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 7-like 0.0
Internal
biog3_v1.0_unigene20314 biogeco3 v1.0 208
AutoFact: Peptidase M50-like protein n=3 Tax=Arabidopsis RepID=O23053_ARATH 2.0e-29
Blast2go: serine protease 1.95341e-42
unknown
biog3_v1.0_unigene20426 biogeco3 v1.0 418
AutoFact: Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] emb|CAL57619.1| Translational repressor Pumilio/PUF3 and related RNA-binding proteins (Puf superfamily) (ISS) [Ostreococcus tauri] 1.99965e-42
FL-Next: sp=Pumilio homolog 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene20598 biogeco3 v1.0 157
AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene21728 biogeco3 v1.0 207
AutoFact: protease Do-like 10 [Arabidopsis thaliana] sp|Q9FIV6.1|DGP10_ARATH RecName: Full=Protease Do-like 10, mitochondrial; Flags: Precursor dbj|BAB11638.1| serine protease-like protein [Arabidopsis thaliana] gb|AAL47441.1| AT5g36950/MLF18_70 [Arabidopsis thalia 0.0
Blast2go: protease do-like mitochondrial-like 0.0
unknown
biog3_v1.0_unigene21986 biogeco3 v1.0 345
AutoFact: Protease degQ, putative n=1 Tax=Ricinus communis RepID=B9SF71_RICCO 0.0
Blast2go: serine-type peptidase 0.0
Putative coding
biog3_v1.0_unigene22584 biogeco3 v1.0 430
AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 0.0
FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protease do-like 7-like 0.0
Internal
biog3_v1.0_unigene23921 biogeco3 v1.0 338
AutoFact: protease Do-like 7 [Arabidopsis thaliana] sp|Q8RY22.1|DEGP7_ARATH RecName: Full=Protease Do-like 7 gb|AAL84951.1| AT3g03380/T21P5_20 [Arabidopsis thaliana] gb|AAO11643.1| At3g03380/T21P5_20 [Arabidopsis thaliana] gb|AEE73938.1| protease Do-like 7 [Arabido 0.0
FL-Next: sp=Protease Do-like 7; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene25329 biogeco3 v1.0 348
AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9T3Z6_RICCO 0.0
Blast2go: protease do-like 7-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain