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Assembly Name: biogeco3 v1.0

Name: Nucleotidyl transferase domain

Term: IPR002934  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1431 biogeco3 v1.0 518
AutoFact: poly(A) polymerase 1 [Arabidopsis thaliana] gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis thaliana gb|AF255297 and contains a Nucleotidyltransferase PF|01909 domain. ESTs gb|AV536592, gb|AV553256, gb|AV561630, 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly polymerase 0.0
Internal
biog3_v1.0_unigene1444 biogeco3 v1.0 375
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
C-terminus
biog3_v1.0_unigene3887 biogeco3 v1.0 387
AutoFact: [A] COG5186 Poly(A) polymerase 0.0
Blast2go: poly polymerase 0.0
unknown
biog3_v1.0_unigene4366 biogeco3 v1.0 514
AutoFact: DCD (Development and Cell Death) domain protein [Arabidopsis thaliana] dbj|BAB01090.1| unnamed protein product [Arabidopsis thaliana] gb|AAL24231.1| AT3g27090/MOJ10_18 [Arabidopsis thaliana] gb|AAM65351.1| AT3g27090/MOJ10_18 [Arabidopsis thaliana] gb|AEE7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dcd (development and cell death) domain protein 0.0
C-terminus
biog3_v1.0_unigene4851 biogeco3 v1.0 1044
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: zinc finger 0.0
C-terminus
biog3_v1.0_unigene5970 biogeco3 v1.0 744
AutoFact: DCD (Development and Cell Death) domain protein [Arabidopsis thaliana] dbj|BAB01090.1| unnamed protein product [Arabidopsis thaliana] gb|AAL24231.1| AT3g27090/MOJ10_18 [Arabidopsis thaliana] gb|AAM65351.1| AT3g27090/MOJ10_18 [Arabidopsis thaliana] gb|AEE7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dcd (development and cell death) domain protein 0.0
N-terminus
biog3_v1.0_unigene6059 biogeco3 v1.0 1061
AutoFact: DCD (Development and Cell Death) domain protein [Arabidopsis thaliana] dbj|BAB01090.1| unnamed protein product [Arabidopsis thaliana] gb|AAL24231.1| AT3g27090/MOJ10_18 [Arabidopsis thaliana] gb|AAM65351.1| AT3g27090/MOJ10_18 [Arabidopsis thaliana] gb|AEE7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gda2 protein 0.0
C-terminus
biog3_v1.0_unigene6713 biogeco3 v1.0 486
AutoFact: nucleotidyltransferase-like protein [Arabidopsis thaliana] gb|AAK25891.1|AF360181_1 unknown protein [Arabidopsis thaliana] gb|AAK64074.1| unknown protein [Arabidopsis thaliana] gb|AAC06161.2| expressed protein [Arabidopsis thaliana] gb|AEC10577.1| nucleot 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleotidyltransferase-like protein 0.0
N-terminus
biog3_v1.0_unigene7104 biogeco3 v1.0 404
AutoFact: Poly(A) polymerase alpha, putative n=1 Tax=Ricinus communis RepID=B9SFV5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly polymerase 0.0
Internal
biog3_v1.0_unigene9461 biogeco3 v1.0 790
AutoFact: DCD (Development and Cell Death) domain protein [Arabidopsis thaliana] dbj|BAB01090.1| unnamed protein product [Arabidopsis thaliana] gb|AAL24231.1| AT3g27090/MOJ10_18 [Arabidopsis thaliana] gb|AAM65351.1| AT3g27090/MOJ10_18 [Arabidopsis thaliana] gb|AEE7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: b2 protein 0.0
C-terminus
biog3_v1.0_unigene10721 biogeco3 v1.0 509
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zinc finger 0.0
Internal
biog3_v1.0_unigene13425 biogeco3 v1.0 312
AutoFact: nucleotidyltransferase-like protein [Arabidopsis thaliana] gb|AAK25891.1|AF360181_1 unknown protein [Arabidopsis thaliana] gb|AAK64074.1| unknown protein [Arabidopsis thaliana] gb|AAC06161.2| expressed protein [Arabidopsis thaliana] gb|AEC10577.1| nucleot 0.0
Blast2go: nucleotidyltransferase-like protein 0.0
Coding
biog3_v1.0_unigene13503 biogeco3 v1.0 304
AutoFact: Os06g0558700 protein n=5 Tax=Oryza sativa RepID=C7J4C8_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear poly polymerase 0.0
Internal
biog3_v1.0_unigene13953 biogeco3 v1.0 518
AutoFact: [L] COG5260 DNA polymerase sigma 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: pap-associated domain-containing protein 5-like 0.0
Internal
biog3_v1.0_unigene16198 biogeco3 v1.0 422
AutoFact: nucleotidyltransferase-like protein [Arabidopsis thaliana] gb|AAK25891.1|AF360181_1 unknown protein [Arabidopsis thaliana] gb|AAK64074.1| unknown protein [Arabidopsis thaliana] gb|AAC06161.2| expressed protein [Arabidopsis thaliana] gb|AEC10577.1| nucleot 0.0
Blast2go: nucleotidyltransferase-like protein 0.0
Putative coding
biog3_v1.0_unigene16815 biogeco3 v1.0 246
AutoFact: poly(A) polymerase 1 [Arabidopsis thaliana] gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis thaliana gb|AF255297 and contains a Nucleotidyltransferase PF|01909 domain. ESTs gb|AV536592, gb|AV553256, gb|AV561630, 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly polymerase 0.0
Internal
biog3_v1.0_unigene17323 biogeco3 v1.0 170
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Internal
biog3_v1.0_unigene21125 biogeco3 v1.0 302
AutoFact: poly(A) polymerase 1 [Arabidopsis thaliana] gb|AAF97277.1|AC034106_20 Strong similarity to nuclear poly(A) polymerase from Arabidopsis thaliana gb|AF255297 and contains a Nucleotidyltransferase PF|01909 domain. ESTs gb|AV536592, gb|AV553256, gb|AV561630, 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly polymerase 0.0
N-terminus
biog3_v1.0_unigene22429 biogeco3 v1.0 298
AutoFact: Poly(A) polymerase alpha, putative n=1 Tax=Ricinus communis RepID=B9SFV5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: poly polymerase 0.0
Internal
biog3_v1.0_unigene23401 biogeco3 v1.0 314
AutoFact: Os06g0558700 protein n=5 Tax=Oryza sativa RepID=C7J4C8_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nuclear poly polymerase 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain