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Assembly Name: biogeco3 v1.0

Name: YTH domain

Term: IPR007275  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene312 biogeco3 v1.0 275
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: uncharacterized protein 0.0
Coding
biog3_v1.0_unigene583 biogeco3 v1.0 332
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene1802 biogeco3 v1.0 2377
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Complete
biog3_v1.0_unigene5726 biogeco3 v1.0 406
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene5811 biogeco3 v1.0 582
AutoFact: pfam04146, YTH, YT521-B-like domain 2.0e-39
Blast2go: yth domain-containing 0.0
unknown
biog3_v1.0_unigene5820 biogeco3 v1.0 1288
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yt521-b-like protein 0.0
C-terminus
biog3_v1.0_unigene5974 biogeco3 v1.0 1296
AutoFact: pfam04146, YTH, YT521-B-like domain 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
N-terminus
biog3_v1.0_unigene6041 biogeco3 v1.0 2210
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 0.0
C-terminus
biog3_v1.0_unigene6705 biogeco3 v1.0 562
AutoFact: Similar to YT521-B-like family domain containing protein (Fragment) n=1 Tax=Triticum aestivum RepID=D8L9K6_WHEAT 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Internal
biog3_v1.0_unigene10450 biogeco3 v1.0 705
AutoFact: cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis thaliana] sp|A9LNK9.1|CPSF_ARATH RecName: Full=Cleavage and polyadenylation specificity factor CPSF30; AltName: Full=Zinc finger CCCH domain-containing protein 11; Short=AtC3H11 gb|ABX260 0.0
FL-Next: Isoform 2 of Cleavage and polyadenylation specificity factor CPSF30 OS=Arabidopsis thaliana GN=CPSF30 0.0
Blast2go: cleavage and polyadenylation specificity factor cpsf30 0.0
Putative C-terminus
biog3_v1.0_unigene13678 biogeco3 v1.0 445
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Internal
biog3_v1.0_unigene16004 biogeco3 v1.0 239
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: uncharacterized protein 0.0
unknown
biog3_v1.0_unigene16927 biogeco3 v1.0 258
AutoFact: DNA methyltransferase [Nicotiana tabacum] 0.0
FL-Next: sp=DNA (cytosine-5)-methyltransferase DRM2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna (cytosine-5)-methyltransferase drm2 0.0
Internal
biog3_v1.0_unigene18535 biogeco3 v1.0 225
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: uncharacterized protein 0.0
unknown
biog3_v1.0_unigene19515 biogeco3 v1.0 237
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: yth domain family protein 0.0
Coding
biog3_v1.0_unigene22049 biogeco3 v1.0 286
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
C-terminus
biog3_v1.0_unigene22542 biogeco3 v1.0 399
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene22574 biogeco3 v1.0 169
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: uncharacterized protein 0.0
unknown
biog3_v1.0_unigene23498 biogeco3 v1.0 148
AutoFact: pfam04146, YTH, YT521-B-like domain 5.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: yth domain family protein 0.0
Internal
biog3_v1.0_unigene24208 biogeco3 v1.0 132
AutoFact: cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis thaliana] sp|A9LNK9.1|CPSF_ARATH RecName: Full=Cleavage and polyadenylation specificity factor CPSF30; AltName: Full=Zinc finger CCCH domain-containing protein 11; Short=AtC3H11 gb|ABX260 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor CPSF30; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage and polyadenylation specificity factor cpsf30 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain