Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Ubiquitin system component Cue

Term: IPR003892  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene1220 biogeco3 v1.0 328
• AutoFact: Ubiquitin system component Cue protein [Arabidopsis thaliana] gb|AEE30873.1| Ubiquitin system component Cue protein [Arabidopsis thaliana] 1.0e-28
• FL-Next: tr=Putative uncharacterized protein; Trifolium repens (Creeping white clover). 0.0
• Blast2go: ubiquitin system component cue protein 6.34634e-37
Internal
biog3_v1.0_unigene1243 biogeco3 v1.0 369
• AutoFact: Ubiquitin system component Cue protein [Arabidopsis thaliana] gb|AAN13090.1| unknown protein [Arabidopsis thaliana] gb|AED93879.1| Ubiquitin system component Cue protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin system component cue protein 0.0
Internal
biog3_v1.0_unigene1303 biogeco3 v1.0 278
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ramosa 1 enhancer locus 2 0.0
Internal
biog3_v1.0_unigene2327 biogeco3 v1.0 1297
• AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene4412 biogeco3 v1.0 614
• AutoFact: 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] gb|AED94476.1| 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] 6.0e-20
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 4.62352e-36
C-terminus
biog3_v1.0_unigene5109 biogeco3 v1.0 364
• AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu 0.0
• FL-Next: sp=E3 ubiquitin protein ligase RIN2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene6983 biogeco3 v1.0 557
• AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene7171 biogeco3 v1.0 997
• AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_001184898.1| uncharacterized protein [Arabidopsis thaliana] gb|AAC72125.1| ESTs gb|H36966, gb|R65511, gb|T42324 and gb|T20569 come from this gene [Arabidopsis thaliana] gb|AEE27554.1| uncharacterized p 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
C-terminus
biog3_v1.0_unigene10215 biogeco3 v1.0 582
• AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_001184898.1| uncharacterized protein [Arabidopsis thaliana] gb|AAC72125.1| ESTs gb|H36966, gb|R65511, gb|T42324 and gb|T20569 come from this gene [Arabidopsis thaliana] gb|AEE27554.1| uncharacterized p 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene10358 biogeco3 v1.0 623
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ramosa 1 enhancer locus 2 0.0
Internal
biog3_v1.0_unigene11952 biogeco3 v1.0 1027
• AutoFact: uncharacterized protein [Arabidopsis thaliana] ref|NP_001184898.1| uncharacterized protein [Arabidopsis thaliana] gb|AAC72125.1| ESTs gb|H36966, gb|R65511, gb|T42324 and gb|T20569 come from this gene [Arabidopsis thaliana] gb|AEE27554.1| uncharacterized p 5.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene12093 biogeco3 v1.0 1873
• AutoFact: Ubiquitin system component Cue protein [Arabidopsis thaliana] gb|AAN13090.1| unknown protein [Arabidopsis thaliana] gb|AED93879.1| Ubiquitin system component Cue protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin system component cue protein 0.0
Complete
biog3_v1.0_unigene13355 biogeco3 v1.0 566
• AutoFact: 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] gb|AED94476.1| 5'-AMP-activated protein kinase-like protein [Arabidopsis thaliana] 6.0e-20
• Blast2go: protein 4.62352e-36
Putative coding
biog3_v1.0_unigene14388 biogeco3 v1.0 276
• AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene15493 biogeco3 v1.0 354
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ramosa 1 enhancer locus 2 0.0
Putative C-terminus
biog3_v1.0_unigene15621 biogeco3 v1.0 327
• AutoFact: E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] ref|NP_849552.1| E3 ubiquitin protein ligase RIN2 [Arabidopsis thaliana] sp|Q8VYC8.1|RIN2_ARATH RecName: Full=E3 ubiquitin protein ligase RIN2; AltName: Full=AMF receptor-like protein 1A; AltName: Fu 0.0
• Blast2go: protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain