Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: RNA-metabolising metallo-beta-lactamase

Term: IPR011108  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1228 biogeco3 v1.0 772
AutoFact: RNA-metabolising metallo-beta-lactamase family protein [Arabidopsis thaliana] gb|AAO42228.1| unknown protein [Arabidopsis thaliana] dbj|BAD93952.1| putative protein [Arabidopsis thaliana] gb|AED97746.1| RNA-metabolising metallo-beta-lactamase family prote 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: ribonuclease j-like 0.0
Internal
biog3_v1.0_unigene2616 biogeco3 v1.0 277
AutoFact: Calmodulin-binding heat-shock protein, putative n=1 Tax=Ricinus communis RepID=B9RIW9_RICCO 0.0
FL-Next: tr=Calmodulin binding heat shock protein; Gossypium hirsutum (Upland cotton) (Gossypium mexicanum). 0.0
Blast2go: calmodulin-binding heat-shock 0.0
Internal
biog3_v1.0_unigene3379 biogeco3 v1.0 2528
AutoFact: cleavage and polyadenylation specificity factor subunit 2 [Arabidopsis thaliana] sp|Q9LKF9.2|CPSF2_ARATH RecName: Full=Cleavage and polyadenylation specificity factor subunit 2; AltName: Full=Cleavage and polyadenylation specificity factor 100 kDa subunit 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: cleavage and polyadenylation specificity factor 0.0
C-terminus
biog3_v1.0_unigene5555 biogeco3 v1.0 271
AutoFact: Calmodulin-binding heat-shock protein, putative n=1 Tax=Ricinus communis RepID=B9RIW9_RICCO 0.0
FL-Next: tr=Alpha/beta-hydrolase domain-containing protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: calmodulin-binding heat-shock 0.0
Internal
biog3_v1.0_unigene6170 biogeco3 v1.0 509
AutoFact: E3 ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName: Full=RING finger protein At4g11680 gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana] gb|AAR23720.1| At4g11680/ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog3_v1.0_unigene10816 biogeco3 v1.0 890
AutoFact: cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] ref|NP_849835.1| cleavage and polyadenylation specificity factor subunit 3-I [Arabidopsis thaliana] ref|NP_001031215.1| cleavage and polyadenylation specificity factor subu 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage and polyadenylation specificity factor subunit 3-i 0.0
Putative C-terminus
biog3_v1.0_unigene13888 biogeco3 v1.0 504
AutoFact: ring zinc finger protein-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cleavage and polyadenylation specificity 0.0
C-terminus
biog3_v1.0_unigene14134 biogeco3 v1.0 652
AutoFact: Calmodulin-binding heat-shock protein, putative n=1 Tax=Ricinus communis RepID=B9RIW9_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: calmodulin-binding heat-shock 0.0
N-terminus
biog3_v1.0_unigene14313 biogeco3 v1.0 356
AutoFact: Calmodulin-binding heat-shock protein, putative n=1 Tax=Ricinus communis RepID=B9RIW9_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: calmodulin-binding heat-shock 0.0
Internal
biog3_v1.0_unigene14753 biogeco3 v1.0 321
AutoFact: E3 ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName: Full=RING finger protein At4g11680 gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana] gb|AAR23720.1| At4g11680/ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Internal
biog3_v1.0_unigene15904 biogeco3 v1.0 179
AutoFact: Calmodulin-binding heat-shock protein, putative n=1 Tax=Ricinus communis RepID=B9RIW9_RICCO 0.0
Blast2go: calmodulin-binding heat-shock 0.0
unknown
biog3_v1.0_unigene20422 biogeco3 v1.0 436
AutoFact: E3 ubiquitin-protein ligase [Arabidopsis thaliana] sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName: Full=RING finger protein At4g11680 gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana] gb|AAR23720.1| At4g11680/ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
N-terminus
biog3_v1.0_unigene22582 biogeco3 v1.0 336
AutoFact: Calmodulin-binding heat-shock protein, putative n=1 Tax=Ricinus communis RepID=B9RIW9_RICCO 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: calmodulin-binding heat-shock 0.0
N-terminus
biog3_v1.0_unigene23308 biogeco3 v1.0 297
AutoFact: putative cleavage and polyadenylation specificity factor [Arabidopsis thaliana] 0.0
FL-Next: sp=Cleavage and polyadenylation specificity factor subunit 3-I; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: cleavage and polyadenylation specificity factor subunit 3-i 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain