Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Domain of unknown function DUF1117

Term: IPR010543  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene3785 biogeco3 v1.0 612
• AutoFact: DUF1117 multi-domain protein 3.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase ring1-like 0.0
Putative C-terminus
biog3_v1.0_unigene4753 biogeco3 v1.0 508
• AutoFact: Putative zinc transporter n=1 Tax=Solanum lycopersicum RepID=A1YIQ6_SOLLC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc transporter 0.0
N-terminus
biog3_v1.0_unigene7312 biogeco3 v1.0 421
• AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 5.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Complete
biog3_v1.0_unigene10476 biogeco3 v1.0 490
• AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 6.0e-26
• FL-Next: sp=DNA topoisomerase; Vitis vinifera (Grape). 0.0
• Blast2go: zinc finger 2.45808e-31
Internal
biog3_v1.0_unigene11200 biogeco3 v1.0 979
• AutoFact: E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana] sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3 ubiquitin-protein ligase CIP8; AltName: Full=COP1-interacting protein 8 gb|AAD56636.1|AF162150_1 COP1-interacting protein CIP8 [Arabidopsis thaliana] dbj|BAA97 5.0e-26
Coding
biog3_v1.0_unigene15259 biogeco3 v1.0 201
• AutoFact: DUF1117 multi-domain protein 3.0e-09
• Blast2go: e3 ubiquitin-protein ligase ring1-like 0.0
unknown
biog3_v1.0_unigene24635 biogeco3 v1.0 153
• AutoFact: DUF1117 multi-domain protein 3.0e-09
• Blast2go: e3 ubiquitin-protein ligase ring1-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain