Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Zinc finger, UBP-type

Term: IPR001607  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene2076 biogeco3 v1.0 610
• AutoFact: Ubiquitin-specific protease family C19-related protein [Arabidopsis thaliana] sp|Q9FZ45.1|Y1686_ARATH RecName: Full=Uncharacterized membrane protein At1g16860 gb|AAF99847.1|AC051629_14 Unknown protein [Arabidopsis thaliana] gb|AAK92824.1| unknown protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized membrane protein at1g16860-like 0.0
C-terminus
biog3_v1.0_unigene2537 biogeco3 v1.0 321
• AutoFact: PREDICTED: histone deacetylase 6-like isoform 8 [Macaca mulatta] 5.0e-22
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: histone deacetylase 0.0
N-terminus
biog3_v1.0_unigene3337 biogeco3 v1.0 578
• AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
• FL-Next: tr=Brca1-associated protein, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: brca1-associated protein 0.0
Putative C-terminus
biog3_v1.0_unigene6047 biogeco3 v1.0 514
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Vitis vinifera RepID=E0CSV0_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 0.0
Internal
biog3_v1.0_unigene6200 biogeco3 v1.0 531
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Vitis vinifera RepID=E0CSV0_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 0.0
N-terminus
biog3_v1.0_unigene9009 biogeco3 v1.0 269
• AutoFact: Ubiquitin-specific protease family C19-related protein [Arabidopsis thaliana] sp|Q9FZ45.1|Y1686_ARATH RecName: Full=Uncharacterized membrane protein At1g16860 gb|AAF99847.1|AC051629_14 Unknown protein [Arabidopsis thaliana] gb|AAK92824.1| unknown protein 0.0
• Blast2go: uncharacterized membrane protein at1g16860-like 0.0
unknown
biog3_v1.0_unigene9187 biogeco3 v1.0 284
• AutoFact: Ubiquitin-specific protease family C19-related protein [Arabidopsis thaliana] sp|Q9FZ45.1|Y1686_ARATH RecName: Full=Uncharacterized membrane protein At1g16860 gb|AAF99847.1|AC051629_14 Unknown protein [Arabidopsis thaliana] gb|AAK92824.1| unknown protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized membrane protein at1g16860-like 0.0
Putative Complete
biog3_v1.0_unigene10359 biogeco3 v1.0 327
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=3 Tax=Vitis vinifera RepID=E0CSV0_VITVI 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 0.0
Internal
biog3_v1.0_unigene11324 biogeco3 v1.0 606
• AutoFact: Ubiquitin-specific protease family C19-related protein [Arabidopsis thaliana] sp|Q9FZ45.1|Y1686_ARATH RecName: Full=Uncharacterized membrane protein At1g16860 gb|AAF99847.1|AC051629_14 Unknown protein [Arabidopsis thaliana] gb|AAK92824.1| unknown protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized membrane protein at1g16860-like 0.0
Internal
biog3_v1.0_unigene13739 biogeco3 v1.0 549
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Populus trichocarpa RepID=B9IMS0_POPTR 0.0
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 22; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ubiquitin carboxyl-terminal hydrolase 22-like 0.0
C-terminus
biog3_v1.0_unigene13817 biogeco3 v1.0 310
• AutoFact: PREDICTED: histone deacetylase 6-like isoform 8 [Macaca mulatta] 5.0e-22
• Blast2go: histone deacetylase 0.0
unknown
biog3_v1.0_unigene17522 biogeco3 v1.0 326
• AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|AAN31917.1| unknown protein [Arabidopsis thaliana] dbj|BAE98689.1| hypothetical protein [Arabidopsis thaliana] gb|AEE84587.1| ubiquitin carboxyl-terminal hydrolase-like protein [ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene18089 biogeco3 v1.0 271
• AutoFact: pfam07576, BRAP2, BRCA1-associated protein 2 9.0e-28
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: brca1-associated protein 0.0
Internal
biog3_v1.0_unigene19561 biogeco3 v1.0 306
• AutoFact: Ubiquitin specific protease 39 and snrnp assembly factor, putative n=1 Tax=Ricinus communis RepID=B9S3J3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene22329 biogeco3 v1.0 315
• AutoFact: Ubiquitin-specific protease family C19-related protein [Arabidopsis thaliana] sp|Q9FZ45.1|Y1686_ARATH RecName: Full=Uncharacterized membrane protein At1g16860 gb|AAF99847.1|AC051629_14 Unknown protein [Arabidopsis thaliana] gb|AAK92824.1| unknown protein 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized membrane protein at1g16860-like 0.0
N-terminus
biog3_v1.0_unigene25892 biogeco3 v1.0 327
• AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|AAN31917.1| unknown protein [Arabidopsis thaliana] dbj|BAE98689.1| hypothetical protein [Arabidopsis thaliana] gb|AEE84587.1| ubiquitin carboxyl-terminal hydrolase-like protein [ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain