Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Zinc finger, HIT-type

Term: IPR007529  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene3015 biogeco3 v1.0 499
AutoFact: tetratricopeptide repeat domain-containing protein [Arabidopsis thaliana] gb|AAU94374.1| At1g56440 [Arabidopsis thaliana] gb|AAX12885.1| At1g56440 [Arabidopsis thaliana] dbj|BAE99447.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33395.1| tetratrico 2.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna polymerase ii-associated protein 3-like 0.0
Putative N-terminus
biog3_v1.0_unigene3747 biogeco3 v1.0 772
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_156.assembly12x (Fragment) n=3 Tax=Vitis vinifera RepID=D7TNX1_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: hit-type zinc finger family protein 0.0
N-terminus
biog3_v1.0_unigene8373 biogeco3 v1.0 518
AutoFact: zinc finger protein [Nicotiana benthamiana] 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger hit domain-containing protein 1 0.0
C-terminus
biog3_v1.0_unigene9178 biogeco3 v1.0 246
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 0.0
Putative coding
biog3_v1.0_unigene14298 biogeco3 v1.0 201
AutoFact: zinc finger protein [Nicotiana benthamiana] 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger hit domain-containing protein 1 0.0
N-terminus
biog3_v1.0_unigene14511 biogeco3 v1.0 307
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog3_v1.0_unigene17623 biogeco3 v1.0 392
AutoFact: probable ATP-dependent RNA helicase DDX59 [Danio rerio] gb|AAI34851.1| LOC562123 protein [Danio rerio] 7.0e-13
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
Internal
biog3_v1.0_unigene19782 biogeco3 v1.0 428
AutoFact: HIT zinc finger family protein n=5 Tax=Andropogoneae RepID=B6TE25_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein Sb01g031320; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: zinc finger hit domain-containing protein 2-like 0.0
Internal
biog3_v1.0_unigene20997 biogeco3 v1.0 307
AutoFact: probable ATP-dependent RNA helicase DDX59 [Danio rerio] gb|AAI34851.1| LOC562123 protein [Danio rerio] 7.0e-13
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
Internal
biog3_v1.0_unigene22071 biogeco3 v1.0 158
AutoFact: zinc finger protein [Nicotiana benthamiana] 1.96182e-44
Blast2go: zinc finger hit domain-containing protein 1 0.0
unknown
biog3_v1.0_unigene23573 biogeco3 v1.0 291
AutoFact: HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] dbj|BAC42342.1| unknown protein [Arabidopsis thaliana] gb|AEE33398.1| HIT zinc finger and PAPA-1-like domain-containing protein [Arabidopsis thaliana] 7.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain