Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Ribonuclease III domain

Term: IPR000999  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene562 biogeco3 v1.0 1282
AutoFact: Ubiquitin fusion degradaton protein, putative n=1 Tax=Ricinus communis RepID=B9STM3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ufd1 like protein 0.0
Putative Complete
biog3_v1.0_unigene3832 biogeco3 v1.0 280
AutoFact: RecName: Full=Endoribonuclease Dicer homolog 4; AltName: Full=Dicer-like protein 4; Short=OsDCL4; AltName: Full=Protein SHOOT ORGANIZATION 1 gb|ABS32306.1| dicer-like protein [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dicer-like protein 4 0.0
Internal
biog3_v1.0_unigene5290 biogeco3 v1.0 466
AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA 0.0
FL-Next: sp=Endoribonuclease Dicer homolog 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: endoribonuclease dicer 0.0
Putative C-terminus
biog3_v1.0_unigene7548 biogeco3 v1.0 407
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T4J0_RICCO 0.0
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene7719 biogeco3 v1.0 541
AutoFact: Similarity to ribonuclease III n=1 Tax=Cryptomeria japonica RepID=Q1XG54_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease iii 0.0
N-terminus
biog3_v1.0_unigene9180 biogeco3 v1.0 1011
AutoFact: Ubiquitin fusion degradaton protein, putative n=1 Tax=Ricinus communis RepID=B9STM3_RICCO 0.0
FL-Next: tr=CM0545.430.nc protein; Lotus japonicus. 0.0
Blast2go: ufd1 like protein 0.0
C-terminus
biog3_v1.0_unigene13716 biogeco3 v1.0 447
AutoFact: Ribonuclease III-like protein [Arabidopsis thaliana] gb|AAQ62445.1| At1g55140 [Arabidopsis thaliana] dbj|BAD42926.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33190.1| Ribonuclease III-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene15117 biogeco3 v1.0 181
AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA 0.0
FL-Next: sp=Endoribonuclease Dicer homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: endoribonuclease dicer 0.0
Internal
biog3_v1.0_unigene19025 biogeco3 v1.0 154
AutoFact: DsRNA-specific nuclease dicer and related ribonuclease n=2 Tax=Physcomitrella patens RepID=A9RV91_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endoribonuclease dicer 0.0
Internal
biog3_v1.0_unigene21261 biogeco3 v1.0 428
AutoFact: CAF protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: endoribonuclease dicer 0.0
Putative C-terminus
biog3_v1.0_unigene24718 biogeco3 v1.0 496
AutoFact: Similarity to ribonuclease III n=1 Tax=Cryptomeria japonica RepID=Q1XG54_CRYJA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonuclease iii 0.0
C-terminus
biog3_v1.0_unigene25326 biogeco3 v1.0 422
AutoFact: Similarity to ribonuclease III n=1 Tax=Cryptomeria japonica RepID=Q1XG54_CRYJA 0.0
Blast2go: ribonuclease iii 0.0
unknown
biog3_v1.0_unigene25850 biogeco3 v1.0 379
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9T4J0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain