Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Domain of unknown function DUF834

Term: IPR008552  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene354 biogeco3 v1.0 238
• AutoFact: Amino acid transporter, putative n=1 Tax=Ricinus communis RepID=B9S1L4_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: amino acid permease-like protein 0.0
Internal
biog3_v1.0_unigene3207 biogeco3 v1.0 460
• AutoFact: Rho GTPase activator, putative 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: rho gtpase activation protein 0.0
Internal
biog3_v1.0_unigene3842 biogeco3 v1.0 390
• AutoFact: Rho GTPase activator, putative 0.0
• Blast2go: rho gtpase activation protein 0.0
unknown
biog3_v1.0_unigene4490 biogeco3 v1.0 313
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene7838 biogeco3 v1.0 400
• AutoFact: Amino acid permease family protein [Arabidopsis thaliana] dbj|BAB02604.1| unnamed protein product [Arabidopsis thaliana] gb|AAL07122.1| unknown protein [Arabidopsis thaliana] gb|AEE75383.1| Amino acid permease family protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: neutral amino acid transport protein 0.0
Putative C-terminus
biog3_v1.0_unigene7914 biogeco3 v1.0 397
• AutoFact: Rho GTPase activator, putative 0.0
• Blast2go: rho gtpase activation protein 0.0
unknown
biog3_v1.0_unigene8435 biogeco3 v1.0 295
• AutoFact: Amino acid permease family protein [Arabidopsis thaliana] dbj|BAB02604.1| unnamed protein product [Arabidopsis thaliana] gb|AAL07122.1| unknown protein [Arabidopsis thaliana] gb|AEE75383.1| Amino acid permease family protein [Arabidopsis thaliana] 0.0
• Blast2go: neutral amino acid transport protein 0.0
unknown
biog3_v1.0_unigene11073 biogeco3 v1.0 919
• AutoFact: RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold n=1 Tax=Medicago truncatula RepID=A2Q2C7_MEDTR 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Blast2go: rna-directed dna polymerase (reverse transcriptase) chromo zinc cchc-type peptidase active site polynucleotidyl ribonuclease h fold 0.0
Putative Complete
biog3_v1.0_unigene11408 biogeco3 v1.0 475
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• Blast2go: retrotransposon unclassified 0.0
unknown
biog3_v1.0_unigene13106 biogeco3 v1.0 463
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene15405 biogeco3 v1.0 181
• AutoFact: Rho GTPase activator, putative 0.0
• FL-Next: tr=Rho GTPase activator, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: rho gtpase activation protein 0.0
Internal
biog3_v1.0_unigene16913 biogeco3 v1.0 361
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Gypsy/Ty-3 retroelement polyprotein; 69905-74404; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: retrotransposon protein 0.0
Internal
biog3_v1.0_unigene17001 biogeco3 v1.0 329
• AutoFact: Amino acid transporter, putative n=1 Tax=Ricinus communis RepID=B9S1L4_RICCO 0.0
• Blast2go: amino acid permease-like protein 0.0
Putative coding
biog3_v1.0_unigene17126 biogeco3 v1.0 256
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: retrotransposon unclassified 0.0
Internal
biog3_v1.0_unigene18366 biogeco3 v1.0 187
• AutoFact: Gag-pol polyprotein n=7 Tax=Glycine max RepID=Q84VH6_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gag-pol polyprotein 0.0
Internal
biog3_v1.0_unigene19528 biogeco3 v1.0 260
• AutoFact: Gypsy/Ty-3 retroelement polyprotein; 69905-74404 n=1 Tax=Arabidopsis thaliana RepID=Q9LHM4_ARATH 0.0
• Blast2go: retrotransposon unclassified 0.0
Putative coding
biog3_v1.0_unigene19793 biogeco3 v1.0 168
• AutoFact: Gag-pol polyprotein n=3 Tax=Zea mays RepID=Q8L7J3_MAIZE 0.0
• FL-Next: sp=Uncharacterized mitochondrial protein AtMg00860; Arabidopsis thaliana (Mouse-ear cress). Mitochondrion. 0.0
• Blast2go: retrotransposon ty3-gypsy subclass 0.0
Internal
biog3_v1.0_unigene21323 biogeco3 v1.0 296
• AutoFact: PREDICTED: similar to polyprotein n=1 Tax=Vitis vinifera RepID=UPI0001983558 0.0
• FL-Next: sp=RNA-directed DNA polymerase homolog; berteroana). Mitochondrion. 0.0
• Blast2go: rna-directed dna polymerase (reverse transcriptase) 0.0
Putative C-terminus
biog3_v1.0_unigene21443 biogeco3 v1.0 371
• AutoFact: Rho GTPase activator, putative 0.0
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: rho gtpase activation protein 0.0
Internal
biog3_v1.0_unigene21536 biogeco3 v1.0 263
• AutoFact: Pol protein integrase region (Fragment) n=1 Tax=Pinus brutia RepID=Q9M6N4_9CONI 5.0e-37
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: pol protein integrase region 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain