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Assembly Name: biogeco3 v1.0

Name: TRAM/LAG1/CLN8 homology domain

Term: IPR006634  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1542 biogeco3 v1.0 473
AutoFact: ASC1-like protein n=1 Tax=Solanum lycopersicum RepID=ASCL_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
Putative C-terminus
biog3_v1.0_unigene3650 biogeco3 v1.0 949
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAT68379.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AAT69230.1| hypothetical protein At3g25950 [Arabidopsis thaliana] gb|AEE77094.1| TRAM, LAG1 an 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene6830 biogeco3 v1.0 1045
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] ref|NP_849545.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] dbj|BAC43394.1| unknown protein [Arabidopsis thaliana] gb|AA 0.0
FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: lag1 and cln8 lipid-sensing domain containing protein 0.0
C-terminus
biog3_v1.0_unigene7379 biogeco3 v1.0 307
AutoFact: Rop guanine nucleotide exchange factor 1 [Arabidopsis thaliana] sp|Q93ZY2.2|ROGF1_ARATH RecName: Full=Rop guanine nucleotide exchange factor 1; Short=RopGEF1; AltName: Full=Kinase partner protein-like; Short=KPP-like emb|CAB37499.1| putative protein [Arab 0.0
FL-Next: tr=Rop guanine nucleotide exchange factor, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene8692 biogeco3 v1.0 365
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAR24215.1| At1g35180 [Arabidopsis thaliana] gb|AAU05502.1| At3g16870 [Arabidopsis thaliana] gb|AEE31763.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containi 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: lag1 and cln8 lipid-sensing domain containing protein 0.0
Putative C-terminus
biog3_v1.0_unigene9709 biogeco3 v1.0 1194
AutoFact: LAG1-like protein 1 n=1 Tax=Orobanche cernua var. cumana RepID=C6KE70_OROCE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
Complete
biog3_v1.0_unigene11147 biogeco3 v1.0 1674
AutoFact: LAG1 longevity assurance homolog 2 [Arabidopsis thaliana] sp|Q9LJK3.1|LAG12_ARATH RecName: Full=LAG1 longevity assurance homolog 2; Short=LAG1 homolog 2 dbj|BAB02967.1| unnamed protein product [Arabidopsis thaliana] gb|AAM61539.1| longevity factor-like pr 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: asc1-like protein 0.0
Complete
biog3_v1.0_unigene16621 biogeco3 v1.0 265
AutoFact: pfam03759, PRONE, PRONE (Plant-specific Rop nucleotide exchanger) 0.0
FL-Next: sp=Rop guanine nucleotide exchange factor 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: rop guanine nucleotide exchange factor 1-like 5.89979e-39
Internal
biog3_v1.0_unigene17008 biogeco3 v1.0 423
AutoFact: TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [Arabidopsis thaliana] gb|AAR24215.1| At1g35180 [Arabidopsis thaliana] gb|AAU05502.1| At3g16870 [Arabidopsis thaliana] gb|AEE31763.1| TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containi 1.0e-11
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: transmembrane protein 8.39774e-16
C-terminus
biog3_v1.0_unigene18141 biogeco3 v1.0 250
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 2.66319e-33
Putative C-terminus
biog3_v1.0_unigene18825 biogeco3 v1.0 352
AutoFact: Rop guanine nucleotide exchange factor 1 [Arabidopsis thaliana] sp|Q93ZY2.2|ROGF1_ARATH RecName: Full=Rop guanine nucleotide exchange factor 1; Short=RopGEF1; AltName: Full=Kinase partner protein-like; Short=KPP-like emb|CAB37499.1| putative protein [Arab 0.0
FL-Next: sp=Rop guanine nucleotide exchange factor 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene20979 biogeco3 v1.0 435
AutoFact: ASC1-like protein n=1 Tax=Solanum lycopersicum RepID=ASCL_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
Putative N-terminus
biog3_v1.0_unigene22986 biogeco3 v1.0 304
AutoFact: pollen-specific kinase partner protein [Solanum lycopersicum] 0.0
FL-Next: sp=Rho guanine nucleotide exchange factor 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23648 biogeco3 v1.0 247
AutoFact: RHO guanyl-nucleotide exchange factor 7 [Arabidopsis thaliana] emb|CAB82974.1| putative protein [Arabidopsis thaliana] gb|AAU94394.1| At5g02010 [Arabidopsis thaliana] gb|AAV59279.1| At5g02010 [Arabidopsis thaliana] gb|AED90419.1| RHO guanyl-nucleotide exc 0.0
FL-Next: sp=Rho guanine nucleotide exchange factor 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23913 biogeco3 v1.0 332
AutoFact: LAG1 longevity assurance homolog 3 n=3 Tax=Arabidopsis RepID=LAG13_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lag1 longevity assurance homolog 3 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain