Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: Translation elongation factor EFTs/EF1B

Term: IPR001816  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene2579 biogeco3 v1.0 381
• AutoFact: chloroplast polyprotein of elongation factor Ts precursor [Arabidopsis thaliana] 0.0
• Blast2go: protein 0.0
Coding
biog3_v1.0_unigene2908 biogeco3 v1.0 814
• AutoFact: elongation factor Ts family protein [Arabidopsis thaliana] emb|CAB43920.1| putative protein [Arabidopsis thaliana] emb|CAB79664.1| putative protein [Arabidopsis thaliana] gb|AAL10483.1| AT4g29060/F19B15_90 [Arabidopsis thaliana] gb|AEE85580.1| elongation 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
biog3_v1.0_unigene7046 biogeco3 v1.0 365
• AutoFact: chloroplast polyprotein of elongation factor Ts precursor [Arabidopsis thaliana] 0.0
• FL-Next: sp=Elongation factor Ts; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene10254 biogeco3 v1.0 622
• AutoFact: chloroplast polyprotein of elongation factor Ts precursor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene11402 biogeco3 v1.0 497
• AutoFact: chloroplast polyprotein of elongation factor Ts precursor [Arabidopsis thaliana] 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene13275 biogeco3 v1.0 525
• AutoFact: Elongation factor Ts (Fragment) n=1 Tax=Vitis vinifera RepID=D7TC42_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: translation elongation factor ts 0.0
Putative N-terminus
biog3_v1.0_unigene13509 biogeco3 v1.0 511
• AutoFact: Elongation factor Ts (Fragment) n=1 Tax=Vitis vinifera RepID=D7TC42_VITVI 0.0
• Blast2go: translation elongation factor ts 0.0
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain