Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: DNA mismatch repair protein MutS, N-terminal

Term: IPR016151  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2033 biogeco3 v1.0 1745
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 0.0
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-1 0.0
Putative C-terminus
biog3_v1.0_unigene3214 biogeco3 v1.0 302
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 0.0
Blast2go: dna mismatch repair protein msh6-1 0.0
unknown
biog3_v1.0_unigene4991 biogeco3 v1.0 703
AutoFact: DNA mismatch repair protein MSH6-2, putative n=1 Tax=Ricinus communis RepID=B9RKT8_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-2 0.0
Internal
biog3_v1.0_unigene13373 biogeco3 v1.0 454
AutoFact: DNA mismatch repair protein [Petunia x hybrida] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna mismatch repair protein msh6-1 0.0
Putative Complete
biog3_v1.0_unigene17977 biogeco3 v1.0 225
AutoFact: Potassium efflux antiporter n=4 Tax=rosids RepID=B9ICA8_POPTR 0.0
FL-Next: sp=K(+) efflux antiporter 2, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: k(+) efflux antiporter chloroplastic-like 0.0
Internal
biog3_v1.0_unigene18400 biogeco3 v1.0 192
AutoFact: Unassigned protein
FL-Next: sp=DNA mismatch repair protein Msh6-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein msh6-2 3.60484e-16
Internal
biog3_v1.0_unigene20607 biogeco3 v1.0 471
AutoFact: DNA mismatch repair protein Msh3 [Arabidopsis thaliana] sp|O65607.2|MSH3_ARATH RecName: Full=DNA mismatch repair protein Msh3; Short=AtMsh3 emb|CAA07684.1| Msh3 protein [Arabidopsis thaliana] gb|AEE85075.1| DNA mismatch repair protein Msh3 [Arabidopsis th 0.0
FL-Next: sp=DNA mismatch repair protein Msh3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein 0.0
Internal
biog3_v1.0_unigene23661 biogeco3 v1.0 419
AutoFact: ATP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SQS1_RICCO 0.0
FL-Next: sp=DNA mismatch repair protein Msh6-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna mismatch repair protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain