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Assembly Name: biogeco3 v1.0

Name: Squamosa promoter-binding protein

Term: IPR017238  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene114 biogeco3 v1.0 339
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene2069 biogeco3 v1.0 381
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9SU35_PHYPA 0.0
Blast2go: protein 0.0
Coding
biog3_v1.0_unigene3453 biogeco3 v1.0 719
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
FL-Next: sp=Squamosa promoter-binding-like protein 15; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: squamosa promoter-binding-like protein 14-like 0.0
C-terminus
biog3_v1.0_unigene4070 biogeco3 v1.0 592
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
FL-Next: sp=Squamosa promoter-binding-like protein 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: squamosa promoter-binding-like protein 14-like 0.0
Internal
biog3_v1.0_unigene4313 biogeco3 v1.0 818
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TAE9_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative Complete
biog3_v1.0_unigene5195 biogeco3 v1.0 1182
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TAE9_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene5317 biogeco3 v1.0 530
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
Blast2go: protein 0.0
Putative coding
biog3_v1.0_unigene5585 biogeco3 v1.0 282
AutoFact: SBP-domain protein 6 [Physcomitrella patens] 8.0e-25
Blast2go: protein 6.4192e-29
Putative coding
biog3_v1.0_unigene6322 biogeco3 v1.0 1097
AutoFact: SBP-domain protein 13 [Physcomitrella patens] 6.0e-38
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding-like protein 6-like 0.0
C-terminus
biog3_v1.0_unigene6652 biogeco3 v1.0 665
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9SU35_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene6885 biogeco3 v1.0 408
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
FL-Next: sp=Squamosa promoter-binding-like protein 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: squamosa promoter-binding-like protein 14-like 0.0
Internal
biog3_v1.0_unigene13667 biogeco3 v1.0 423
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RSX0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding-like protein 7 0.0
Putative C-terminus
biog3_v1.0_unigene13865 biogeco3 v1.0 343
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RSX0_RICCO 0.0
Blast2go: squamosa promoter-binding-like protein 7 0.0
unknown
biog3_v1.0_unigene14954 biogeco3 v1.0 384
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TAE9_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene19123 biogeco3 v1.0 218
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TAE9_PHYPA 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene22421 biogeco3 v1.0 361
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RSX0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding-like protein 7 0.0
Internal
biog3_v1.0_unigene23208 biogeco3 v1.0 130
AutoFact: SBP-domain protein 6 [Physcomitrella patens] 8.0e-25
Blast2go: protein 6.4192e-29
unknown
biog3_v1.0_unigene23513 biogeco3 v1.0 298
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9SU35_PHYPA 0.0
FL-Next: sp=Squamosa promoter-binding-like protein 8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene24486 biogeco3 v1.0 236
AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene24710 biogeco3 v1.0 585
AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RSX0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: squamosa promoter-binding-like protein 7 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain