Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Transcription factor, SBP-box

Term: IPR004333  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene114 biogeco3 v1.0 339
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene187 biogeco3 v1.0 420
• AutoFact: RecName: Full=Squamosa promoter-binding-like protein 15 sp|A2YX04.1|SPL15_ORYSI RecName: Full=Squamosa promoter-binding-like protein 15 dbj|BAD10073.1| putative SPL1-Related2 protein [Oryza sativa Japonica Group] gb|EAZ07615.1| hypothetical protein OsI_29 7.0e-31
• FL-Next: sp=Squamosa promoter-binding-like protein 16; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: squamosa promoter-binding-like protein 14-like 6.92821e-38
Internal
biog3_v1.0_unigene2069 biogeco3 v1.0 381
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9SU35_PHYPA 0.0
• Blast2go: protein 0.0
Coding
biog3_v1.0_unigene3453 biogeco3 v1.0 719
• AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
• FL-Next: sp=Squamosa promoter-binding-like protein 15; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: squamosa promoter-binding-like protein 14-like 0.0
C-terminus
biog3_v1.0_unigene4070 biogeco3 v1.0 592
• AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
• FL-Next: sp=Squamosa promoter-binding-like protein 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: squamosa promoter-binding-like protein 14-like 0.0
Internal
biog3_v1.0_unigene4313 biogeco3 v1.0 818
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TAE9_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Putative Complete
biog3_v1.0_unigene4795 biogeco3 v1.0 530
• AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RVW3_RICCO 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: squamosa promoter-binding 0.0
C-terminus
biog3_v1.0_unigene5195 biogeco3 v1.0 1182
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TAE9_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene5317 biogeco3 v1.0 530
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TKM8_PHYPA 0.0
• Blast2go: protein 0.0
Putative coding
biog3_v1.0_unigene5585 biogeco3 v1.0 282
• AutoFact: SBP-domain protein 6 [Physcomitrella patens] 8.0e-25
• Blast2go: protein 6.4192e-29
Putative coding
biog3_v1.0_unigene6322 biogeco3 v1.0 1097
• AutoFact: SBP-domain protein 13 [Physcomitrella patens] 6.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: squamosa promoter-binding-like protein 6-like 0.0
C-terminus
biog3_v1.0_unigene6652 biogeco3 v1.0 665
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9SU35_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene6885 biogeco3 v1.0 408
• AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9R8V3_RICCO 0.0
• FL-Next: sp=Squamosa promoter-binding-like protein 14; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: squamosa promoter-binding-like protein 14-like 0.0
Internal
biog3_v1.0_unigene8466 biogeco3 v1.0 827
• AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZZ7_RICCO 0.0
• FL-Next: sp=Squamosa promoter-binding-like protein 12; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: squamosa promoter-binding-like protein 1-like 0.0
C-terminus
biog3_v1.0_unigene9319 biogeco3 v1.0 598
• AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZZ7_RICCO 0.0
• FL-Next: sp=Squamosa promoter-binding-like protein 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: squamosa promoter-binding-like protein 1-like 0.0
Internal
biog3_v1.0_unigene10115 biogeco3 v1.0 742
• AutoFact: Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S5U2_PHYPA 2.0e-12
• FL-Next: tr=SBP-domain protein 13; Physcomitrella patens. 0.0
• Blast2go: protein 1.2698e-12
Internal
biog3_v1.0_unigene13667 biogeco3 v1.0 423
• AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RSX0_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: squamosa promoter-binding-like protein 7 0.0
Putative C-terminus
biog3_v1.0_unigene13865 biogeco3 v1.0 343
• AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RSX0_RICCO 0.0
• Blast2go: squamosa promoter-binding-like protein 7 0.0
unknown
biog3_v1.0_unigene14954 biogeco3 v1.0 384
• AutoFact: Predicted protein n=2 Tax=Physcomitrella patens RepID=A9TAE9_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene18687 biogeco3 v1.0 253
• AutoFact: Squamosa promoter-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RZZ7_RICCO 0.0
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: squamosa promoter-binding-like protein 1-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain