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Assembly Name: biogeco3 v1.0

Name: XPG/RAD2 endonuclease

Term: IPR006086  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene11161 biogeco3 v1.0 1242
AutoFact: Flap endonuclease 1 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=FEN1_OSTLU 0.0
FL-Next: sp=Flap endonuclease 1; Glycine max (Soybean) (Glycine hispida). 0.0
Blast2go: flap endonuclease-1 0.0
Complete
biog3_v1.0_unigene11930 biogeco3 v1.0 405
AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 2.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: at1g13410-like protein 0.0
Putative Complete
biog3_v1.0_unigene17288 biogeco3 v1.0 315
AutoFact: DNA repair protein UVH3 [Arabidopsis thaliana] sp|Q9ATY5.1|UVH3_ARATH RecName: Full=DNA repair protein UVH3; AltName: Full=ERCC5 homolog; AltName: Full=RAD2 homolog; Short=AtRAD2; Short=AtUVH3; Short=AtXPG; AltName: Full=UV hypersensitive protein 3; AltNa 9.0e-37
FL-Next: sp=DNA repair protein UVH3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-repair protein 1.4013e-45
Internal
biog3_v1.0_unigene19033 biogeco3 v1.0 188
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDJ8_RICCO 0.0
Blast2go: 5 -3 exonuclease-like protein 0.0
unknown
biog3_v1.0_unigene19821 biogeco3 v1.0 254
AutoFact: DNA-repair protein UVH3, putative n=1 Tax=Ricinus communis RepID=B9RUC5_RICCO 0.0
FL-Next: sp=DNA repair protein UVH3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna-repair protein 0.0
Internal
biog3_v1.0_unigene19952 biogeco3 v1.0 192
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDJ8_RICCO 0.0
FL-Next: sp=Flap endonuclease GEN-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: 5 -3 exonuclease-like protein 0.0
Internal
biog3_v1.0_unigene21084 biogeco3 v1.0 319
AutoFact: DNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RDJ8_RICCO 0.0
FL-Next: sp=Flap endonuclease GEN-like 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: 5 -3 exonuclease-like protein 0.0
Internal
biog3_v1.0_unigene24069 biogeco3 v1.0 333
AutoFact: 5'-3' exonuclease family protein n=4 Tax=Arabidopsis RepID=Q94A33_ARATH 1.0e-32
FL-Next: sp=Exonuclease 1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein 4.29358e-42
Internal
biog3_v1.0_unigene24133 biogeco3 v1.0 237
AutoFact: flap endonuclease-1 [Arabidopsis thaliana] gb|AED93576.1| flap endonuclease-1 [Arabidopsis thaliana] 0.0
Blast2go: flap endonuclease 1a 0.0
unknown
biog3_v1.0_unigene26312 biogeco3 v1.0 346
AutoFact: PPR multi-domain protein 5.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein at3g29230-like 1.43069e-38
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain