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Assembly Name: biogeco3 v1.0

Name: DNA ligase, ATP-dependent, central

Term: IPR012310  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1588 biogeco3 v1.0 844
AutoFact: mRNA capping enzyme-like protein [Arabidopsis thaliana] gb|AEE74723.1| mRNA capping enzyme-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: mrna-capping enzyme-like 0.0
C-terminus
biog3_v1.0_unigene2302 biogeco3 v1.0 321
AutoFact: DNA ligase (Fragment) n=2 Tax=Vitis vinifera RepID=D7SQI2_VITVI 0.0
FL-Next: sp=Putative DNA ligase 4; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: dna ligase 0.0
Internal
biog3_v1.0_unigene3201 biogeco3 v1.0 1170
AutoFact: mRNA capping enzyme-like protein [Arabidopsis thaliana] gb|AEE74723.1| mRNA capping enzyme-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mrna-capping enzyme-like 0.0
Internal
biog3_v1.0_unigene6686 biogeco3 v1.0 332
AutoFact: mRNA capping enzyme-like protein [Arabidopsis thaliana] gb|AEE74723.1| mRNA capping enzyme-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Os12g0193200 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: mrna-capping enzyme-like 0.0
Internal
biog3_v1.0_unigene14467 biogeco3 v1.0 381
AutoFact: DNA ligase n=5 Tax=Poaceae RepID=Q7XD67_ORYSJ 0.0
FL-Next: sp=DNA ligase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna ligase 0.0
Internal
biog3_v1.0_unigene15043 biogeco3 v1.0 433
AutoFact: mRNA capping enzyme-like protein [Arabidopsis thaliana] gb|AEE74723.1| mRNA capping enzyme-like protein [Arabidopsis thaliana] 0.0
Blast2go: mrna-capping enzyme-like 0.0
Coding
biog3_v1.0_unigene15749 biogeco3 v1.0 115
AutoFact: DNA ligase n=5 Tax=Poaceae RepID=Q7XD67_ORYSJ 0.0
Blast2go: dna ligase 0.0
unknown
biog3_v1.0_unigene19513 biogeco3 v1.0 243
AutoFact: DNA ligase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TSX4_VITVI 7.0e-28
Blast2go: dna ligase 1.80942e-34
unknown
biog3_v1.0_unigene20032 biogeco3 v1.0 318
AutoFact: DNA ligase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TSX4_VITVI 0.0
FL-Next: sp=DNA ligase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna ligase 0.0
Internal
biog3_v1.0_unigene23716 biogeco3 v1.0 241
AutoFact: DNA ligase n=1 Tax=Populus trichocarpa RepID=B9IN68_POPTR 7.0e-26
FL-Next: sp=DNA ligase 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna ligase 5.58879e-30
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain