Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: CO/COL/TOC1, conserved site

Term: IPR018467  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene5452 biogeco3 v1.0 631
• AutoFact: RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group] dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group] 1.0e-21
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 2.6633e-24
N-terminus
biog3_v1.0_unigene9538 biogeco3 v1.0 964
• AutoFact: protein TIFY 6B [Arabidopsis thaliana] sp|Q9LVI4.1|TIF6B_ARATH RecName: Full=Protein TIFY 6B; AltName: Full=Jasmonate ZIM domain-containing protein 3; AltName: Full=Protein JASMONATE INSENSITIVE 3 gb|AAK49623.1|AF372907_1 AT3g17860/MEB5_8 [Arabidopsis tha 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein tify 6b 0.0
Internal
biog3_v1.0_unigene11227 biogeco3 v1.0 1411
• AutoFact: tify multi-domain protein 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: jasmonate zim-domain protein 0.0
C-terminus
biog3_v1.0_unigene11306 biogeco3 v1.0 1050
• AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene11617 biogeco3 v1.0 1505
• AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Complete
biog3_v1.0_unigene13231 biogeco3 v1.0 523
• AutoFact: tify multi-domain protein 6.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: jasmonate zim-domain protein 0.0
N-terminus
biog3_v1.0_unigene16533 biogeco3 v1.0 248
• AutoFact: protein TIFY 6B [Arabidopsis thaliana] sp|Q9LVI4.1|TIF6B_ARATH RecName: Full=Protein TIFY 6B; AltName: Full=Jasmonate ZIM domain-containing protein 3; AltName: Full=Protein JASMONATE INSENSITIVE 3 gb|AAK49623.1|AF372907_1 AT3g17860/MEB5_8 [Arabidopsis tha 3.0e-18
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein tify 6b 0.0
N-terminus
biog3_v1.0_unigene18078 biogeco3 v1.0 167
• AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene19962 biogeco3 v1.0 302
• AutoFact: tify multi-domain protein 6.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: unknown [Picea sitchensis] 0.0
Internal
biog3_v1.0_unigene21376 biogeco3 v1.0 243
• AutoFact: tify multi-domain protein 5.0e-12
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein tify 6b-like 0.0
Internal
biog3_v1.0_unigene25791 biogeco3 v1.0 248
• AutoFact: Male-specific transcription factor M88B7.2 n=1 Tax=Marchantia polymorpha RepID=Q6J3Q5_MARPO 0.0
• Blast2go: protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain