Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Pseudouridine synthase/archaeosine transglycosylase

Term: IPR002478  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene404 biogeco3 v1.0 116
AutoFact: rRNA intron-encoded homing endonuclease [Oryza sativa] 7.0e-17
Blast2go: rrna intron-encoded homing endonuclease 0.0
Putative ncRNA
biog3_v1.0_unigene3547 biogeco3 v1.0 479
AutoFact: RNA binding protein, putative n=1 Tax=Ricinus communis RepID=B9RRQ3_RICCO 3.0e-06
FL-Next: tr=RNA binding protein, putative; Ricinus communis (Castor bean). 0.0
C-terminus
biog3_v1.0_unigene4362 biogeco3 v1.0 368
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: eukaryotic translation initiation factor 2d-like 6.44037e-14
C-terminus
biog3_v1.0_unigene5749 biogeco3 v1.0 616
AutoFact: eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] dbj|BAE99137.1| hypothetical protein [Arabidopsis thaliana] gb|AEE35192.1| eukaryotic translation initiation factor SUI1-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Eukaryotic translation initiation factor SUI1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: eukaryotic translation initiation factor 2d-like 0.0
Internal
biog3_v1.0_unigene6029 biogeco3 v1.0 1352
AutoFact: H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] sp|Q9LD90.1|DKC1_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=Nopp-140-associated protein of 57 kDa homolog; Short=AtNAP57; AltName: Full=Nucleolar protein NA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene6162 biogeco3 v1.0 356
AutoFact: RNA binding protein [Arabidopsis thaliana] gb|AAS76220.1| At4g15770 [Arabidopsis thaliana] gb|AEE83650.1| RNA binding protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene6734 biogeco3 v1.0 616
AutoFact: Plant origin recognition complex subunit, putative n=1 Tax=Ricinus communis RepID=B9SP26_RICCO 0.0
FL-Next: sp=Origin recognition complex subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: origin recognition complex subunit 2 0.0
C-terminus
biog3_v1.0_unigene9179 biogeco3 v1.0 724
AutoFact: MLL [Hordeum vulgare subsp. vulgare] gb|ACK99544.1| MCT-1 [Hordeum vulgare subsp. vulgare] gb|ACK99545.1| MCT-1 [Hordeum vulgare] emb|CBI83389.1| MCT-1 like PUA RNA binding-domain containing protein [Hordeum vulgare subsp. vulgare] emb|CBI83391.1| MCT-1 l 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mct-1 like pua rna binding-domain containing protein 0.0
C-terminus
biog3_v1.0_unigene13781 biogeco3 v1.0 468
AutoFact: S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] gb|AEE33079.1| S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ribosomal rna large subunit methyltransferase i-like 0.0
Internal
biog3_v1.0_unigene14302 biogeco3 v1.0 204
AutoFact: rRNA intron-encoded homing endonuclease [Oryza sativa] 7.0e-17
FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
Blast2go: rrna intron-encoded homing endonuclease 0.0
Putative Complete
biog3_v1.0_unigene17337 biogeco3 v1.0 54
AutoFact: rRNA intron-encoded homing endonuclease [Oryza sativa] 7.0e-17
Blast2go: rrna intron-encoded homing endonuclease 0.0
unknown
biog3_v1.0_unigene18287 biogeco3 v1.0 298
AutoFact: Unassigned protein
Blast2go: eukaryotic translation initiation factor 2d-like 6.44037e-14
unknown
biog3_v1.0_unigene18758 biogeco3 v1.0 207
AutoFact: Plant origin recognition complex subunit, putative n=1 Tax=Ricinus communis RepID=B9SP26_RICCO 0.0
FL-Next: sp=Origin recognition complex subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: origin recognition complex subunit 2 0.0
Internal
biog3_v1.0_unigene20241 biogeco3 v1.0 235
AutoFact: Plant origin recognition complex subunit, putative n=1 Tax=Ricinus communis RepID=B9SP26_RICCO 0.0
FL-Next: sp=Origin recognition complex subunit 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: origin recognition complex subunit 2 0.0
Internal
biog3_v1.0_unigene23210 biogeco3 v1.0 206
AutoFact: S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] gb|AEE33079.1| S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ribosomal rna large subunit methyltransferase i-like 0.0
Internal
biog3_v1.0_unigene25465 biogeco3 v1.0 146
AutoFact: NOP2/Sun domain family, member 6 [Xenopus (Silurana) tropicalis] gb|AAH81330.1| nsun6 protein [Xenopus (Silurana) tropicalis] 7.0e-24
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: methyltransferase nsun6-like 1.54143e-44
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain