Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Transcription factor TFIIB, cyclin-related

Term: IPR013150  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2434 biogeco3 v1.0 784
AutoFact: transcription initiation factor IIB-2 [Arabidopsis thaliana] sp|Q9SS44.1|TF2B2_ARATH RecName: Full=Transcription initiation factor IIB-2; AltName: Full=General transcription factor TFIIB-2; Short=AtTFIIB2 gb|AAF02810.1|AC009400_6 transcription initiation 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor iib 0.0
N-terminus
biog3_v1.0_unigene3416 biogeco3 v1.0 207
AutoFact: cyclin H-1 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Cyclin-H1-1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: cyclin h-1 0.0
Internal
biog3_v1.0_unigene5693 biogeco3 v1.0 194
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
C-terminus
biog3_v1.0_unigene9500 biogeco3 v1.0 197
AutoFact: transcription initiation factor IIB-2 [Arabidopsis thaliana] sp|Q9SS44.1|TF2B2_ARATH RecName: Full=Transcription initiation factor IIB-2; AltName: Full=General transcription factor TFIIB-2; Short=AtTFIIB2 gb|AAF02810.1|AC009400_6 transcription initiation 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor iib 0.0
Putative C-terminus
biog3_v1.0_unigene11724 biogeco3 v1.0 1645
AutoFact: Transcription initiation factor IIB n=7 Tax=Poaceae RepID=TF2B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor iib 0.0
Complete
biog3_v1.0_unigene13105 biogeco3 v1.0 662
AutoFact: transcription initiation factor IIB-2 [Arabidopsis thaliana] sp|Q9SS44.1|TF2B2_ARATH RecName: Full=Transcription initiation factor IIB-2; AltName: Full=General transcription factor TFIIB-2; Short=AtTFIIB2 gb|AAF02810.1|AC009400_6 transcription initiation 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: transcription initiation factor iib 0.0
Internal
biog3_v1.0_unigene13448 biogeco3 v1.0 398
AutoFact: cyclin H-1 [Oryza sativa Japonica Group] 0.0
FL-Next: sp=Cyclin-H1-1; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: cyclin h-1 0.0
C-terminus
biog3_v1.0_unigene15563 biogeco3 v1.0 153
AutoFact: Transcription initiation factor IIB n=7 Tax=Poaceae RepID=TF2B_ORYSJ 0.0
Blast2go: transcription initiation factor iib 0.0
unknown
biog3_v1.0_unigene17069 biogeco3 v1.0 277
AutoFact: cyclin H-1 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cyclin h-1 0.0
Internal
biog3_v1.0_unigene20018 biogeco3 v1.0 298
AutoFact: cyclin H-1 [Oryza sativa Japonica Group] 0.0
Blast2go: cyclin h-1 0.0
unknown
biog3_v1.0_unigene20634 biogeco3 v1.0 386
AutoFact: WS0287.B21_H05 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS0287_H05 5, mRNA sequence. 1.0e-32
Blast2go: transcription factor iiib 90 kda subunit-like 2.30303e-23
unknown
biog3_v1.0_unigene20804 biogeco3 v1.0 206
AutoFact: Transcription initiation factor IIB-2 n=10 Tax=rosids RepID=TF2B2_ARATH 5.0e-35
Blast2go: transcription initiation factor iib 9.48708e-35
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain