Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Helix-turn-helix motif

Term: IPR000047  Help

Source: InterPro from Sma3

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene33 biogeco3 v1.0 743
• AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper protein hat5-like 0.0
C-terminus
biog3_v1.0_unigene499 biogeco3 v1.0 1659
• AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 1.00053e-42
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper protein hat5-like 0.0
Complete
biog3_v1.0_unigene571 biogeco3 v1.0 793
• AutoFact: homeodomain-leucine zipper protein 56 [Glycine max] 8.00001e-41
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper protein athb-6-like 0.0
Putative N-terminus
biog3_v1.0_unigene1551 biogeco3 v1.0 384
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 5.0e-32
• FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeobox-leucine zipper protein anthocyaninless 2-like 7.64948e-36
N-terminus
biog3_v1.0_unigene1803 biogeco3 v1.0 215
• AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 9.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper protein athb-13 0.0
Internal
biog3_v1.0_unigene2720 biogeco3 v1.0 1431
• AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper protein athb-6-like 2.01282e-38
Putative N-terminus
biog3_v1.0_unigene4535 biogeco3 v1.0 439
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeodomain protein 0.0
Internal
biog3_v1.0_unigene4685 biogeco3 v1.0 458
• AutoFact: homeodomain-leucine zipper protein 56 [Glycine max] 8.00001e-41
• Blast2go: homeobox-leucine zipper protein athb-6-like 0.0
Coding
biog3_v1.0_unigene4794 biogeco3 v1.0 701
• AutoFact: Homeobox protein, putative n=1 Tax=Ricinus communis RepID=B9R943_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: homeobox-leucine zipper protein hat5-like 0.0
N-terminus
biog3_v1.0_unigene5207 biogeco3 v1.0 1110
• AutoFact: homeodomain-leucine zipper protein 57 [Glycine max] 5.0e-34
• Blast2go: homeobox-leucine zipper protein athb-6-like 2.01282e-38
Coding
biog3_v1.0_unigene6589 biogeco3 v1.0 409
• AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
Internal
biog3_v1.0_unigene6677 biogeco3 v1.0 348
• AutoFact: DNA-binding protein (Fragment) n=1 Tax=Catharanthus roseus RepID=A1DR78_CATRO 2.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hdzip i protein 0.0
Internal
biog3_v1.0_unigene7361 biogeco3 v1.0 1047
• AutoFact: Homeobox 1 n=1 Tax=Picea abies RepID=Q9FR59_PICAB 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeobox-leucine zipper protein hdg2-like 0.0
C-terminus
biog3_v1.0_unigene7700 biogeco3 v1.0 442
• AutoFact: homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_849596.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] ref|NP_001184911.1| homeobox-leucine zipper protein HDG2 [Arabidopsis thaliana] sp|Q94C37.1|HDG2_ARATH RecName: Full=H 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeobox-leucine zipper protein hdg2 0.0
N-terminus
biog3_v1.0_unigene9100 biogeco3 v1.0 493
• AutoFact: Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T2B9_PHYPA 1.0e-10
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 1.25689e-11
N-terminus
biog3_v1.0_unigene9233 biogeco3 v1.0 287
• AutoFact: homeodomain-leucine zipper protein 56 [Glycine max] 8.00001e-41
• Blast2go: homeobox-leucine zipper protein athb-6-like 0.0
unknown
biog3_v1.0_unigene10211 biogeco3 v1.0 1511
• AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: hd domain class transcription factor 0.0
Complete
biog3_v1.0_unigene11083 biogeco3 v1.0 473
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
• FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeobox-leucine zipper protein meristem l1 0.0
C-terminus
biog3_v1.0_unigene13192 biogeco3 v1.0 552
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ43 [Physcomitrella patens] 0.0
• FL-Next: tr=Homeobox 1; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeobox-leucine zipper protein meristem l1 0.0
Internal
biog3_v1.0_unigene13610 biogeco3 v1.0 275
• AutoFact: Homeobox-leucine zipper-like protein n=2 Tax=Picea RepID=Q3HRT1_PICGL 3.9937e-43
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain