Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: SKP1 component

Term: IPR001232  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene3264 biogeco3 v1.0 455
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAP68214.1| At4g24530 [Arabidopsis thaliana] dbj|BAE99793.1| PsRT17-1 like protein [Arabidopsis thaliana] gb|AEE84921.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
Internal
biog3_v1.0_unigene5416 biogeco3 v1.0 511
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAP68214.1| At4g24530 [Arabidopsis thaliana] dbj|BAE99793.1| PsRT17-1 like protein [Arabidopsis thaliana] gb|AEE84921.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
Putative C-terminus
biog3_v1.0_unigene10725 biogeco3 v1.0 742
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RDT2_RICCO 0.0
FL-Next: Isoform 3 of SKP1-like protein 20 OS=Arabidopsis thaliana GN=ASK20 0.0
Blast2go: skp1-like protein 21-like 0.0
N-terminus
biog3_v1.0_unigene12263 biogeco3 v1.0 937
AutoFact: SCF ubiquitin ligase n=4 Tax=Picea RepID=Q3ZDI8_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene15576 biogeco3 v1.0 290
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RDT2_RICCO 0.0
Blast2go: skp1-like protein 21-like 0.0
unknown
biog3_v1.0_unigene17779 biogeco3 v1.0 201
AutoFact: Ubiquitin-protein ligase, putative n=1 Tax=Ricinus communis RepID=B9RDT2_RICCO 0.0
FL-Next: sp=SKP1-like protein 21; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: skp1-like protein 21-like 0.0
Internal
biog3_v1.0_unigene18229 biogeco3 v1.0 230
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAP68214.1| At4g24530 [Arabidopsis thaliana] dbj|BAE99793.1| PsRT17-1 like protein [Arabidopsis thaliana] gb|AEE84921.1| O-fucosyltransferase family protein [Arabidopsis thaliana] 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
unknown
biog3_v1.0_unigene20989 biogeco3 v1.0 546
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAM26669.1| AT4g16650/dl4350w [Arabidopsis thaliana] gb|AAN18192.1| At4g16650/dl4350w [Arabidopsis thaliana] dbj|BAD43586.1| growth regulator like protein [Arabidopsis thaliana] gb|AEE83780.1| 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
Internal
biog3_v1.0_unigene21902 biogeco3 v1.0 208
AutoFact: O-fucosyltransferase family protein [Arabidopsis thaliana] gb|AAC67324.1| similar to axi 1 protein from Nicotiana tabacum [Arabidopsis thaliana] gb|AAM13108.1| similar to axi 1 protein [Arabidopsis thaliana] gb|AAM91218.1| similar to axi 1 protein [Arabid 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: duf246 domain-containing protein at1g04910-like 0.0
Internal
biog3_v1.0_unigene22681 biogeco3 v1.0 249
AutoFact: Unassigned protein
Blast2go: skp1-like protein 21-like 7.39522e-13
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain