Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: BSD

Term: IPR005607  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1615 biogeco3 v1.0 181
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.0e-36
Blast2go: histone h2a 1.71538e-38
unknown
biog3_v1.0_unigene1838 biogeco3 v1.0 1261
AutoFact: BSD domain-containing protein [Arabidopsis thaliana] dbj|BAB11138.1| unnamed protein product [Arabidopsis thaliana] gb|AAK59438.1| unknown protein [Arabidopsis thaliana] gb|AAM44972.1| unknown protein [Arabidopsis thaliana] gb|AED98122.1| BSD domain-conta 1.99993e-41
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bsd domain containing protein 0.0
C-terminus
biog3_v1.0_unigene6809 biogeco3 v1.0 714
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.0e-36
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.71538e-38
Complete
biog3_v1.0_unigene6997 biogeco3 v1.0 515
AutoFact: BSD domain-containing protein [Arabidopsis thaliana] gb|AAK96502.1| At1g26300/F28B23_4 [Arabidopsis thaliana] gb|AAM98113.1| At1g26300/F28B23_4 [Arabidopsis thaliana] dbj|BAD43006.1| unnamed protein product [Arabidopsis thaliana] dbj|BAD44463.1| unnamed p 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene7246 biogeco3 v1.0 842
AutoFact: BSD domain-containing protein [Arabidopsis thaliana] gb|AAK96502.1| At1g26300/F28B23_4 [Arabidopsis thaliana] gb|AAM98113.1| At1g26300/F28B23_4 [Arabidopsis thaliana] dbj|BAD43006.1| unnamed protein product [Arabidopsis thaliana] dbj|BAD44463.1| unnamed p 7.00649e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene9554 biogeco3 v1.0 303
AutoFact: PREDICTED: similar to BSD domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI000198335A 0.0
Blast2go: bsd domain-containing protein 0.0
unknown
biog3_v1.0_unigene9828 biogeco3 v1.0 466
AutoFact: Protein binding protein, putative (Fragment) n=1 Tax=Ricinus communis RepID=B9T4R7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: btb poz domain-containing protein 0.0
Internal
biog3_v1.0_unigene10606 biogeco3 v1.0 746
AutoFact: PREDICTED: similar to BSD domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI000198335A 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: bsd domain-containing protein 0.0
Putative C-terminus
biog3_v1.0_unigene12185 biogeco3 v1.0 644
AutoFact: BSD domain-containing protein [Arabidopsis thaliana] dbj|BAB11138.1| unnamed protein product [Arabidopsis thaliana] gb|AAK59438.1| unknown protein [Arabidopsis thaliana] gb|AAM44972.1| unknown protein [Arabidopsis thaliana] gb|AED98122.1| BSD domain-conta 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: bsd domain-containing protein 0.0
Putative C-terminus
biog3_v1.0_unigene16755 biogeco3 v1.0 212
AutoFact: PREDICTED: similar to BSD domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI000198335A 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: bsd domain-containing protein 0.0
Internal
biog3_v1.0_unigene17851 biogeco3 v1.0 191
AutoFact: BSD domain-containing protein [Arabidopsis thaliana] dbj|BAB11138.1| unnamed protein product [Arabidopsis thaliana] gb|AAK59438.1| unknown protein [Arabidopsis thaliana] gb|AAM44972.1| unknown protein [Arabidopsis thaliana] gb|AED98122.1| BSD domain-conta 3.9937e-43
Blast2go: bsd domain-containing protein 0.0
unknown
biog3_v1.0_unigene18126 biogeco3 v1.0 197
AutoFact: PREDICTED: similar to BSD domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI000198335A 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: bsd domain-containing protein 0.0
Internal
biog3_v1.0_unigene19541 biogeco3 v1.0 213
AutoFact: BSD domain-containing protein [Arabidopsis thaliana] dbj|BAB11138.1| unnamed protein product [Arabidopsis thaliana] gb|AAK59438.1| unknown protein [Arabidopsis thaliana] gb|AAM44972.1| unknown protein [Arabidopsis thaliana] gb|AED98122.1| BSD domain-conta 3.9937e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: bsd domain-containing protein 0.0
Internal
biog3_v1.0_unigene20529 biogeco3 v1.0 398
AutoFact: PREDICTED: similar to BSD domain-containing protein n=1 Tax=Vitis vinifera RepID=UPI000198335A 0.0
Blast2go: bsd domain-containing protein 0.0
Putative coding
biog3_v1.0_unigene22905 biogeco3 v1.0 294
AutoFact: transcription initiation factor TFIIH subunit H1 [Arabidopsis thaliana] sp|Q3ECP0.1|TFB1A_ARATH RecName: Full=Probable RNA polymerase II transcription factor B subunit 1-1; AltName: Full=General transcription and DNA repair factor IIH subunit TFB1-1; Shor 1.0e-26
FL-Next: Isoform 2 of Probable RNA polymerase II transcription factor B subunit 1-3 OS=Arabidopsis thaliana GN=TFB1-3 0.0
Blast2go: transcription initiation factor tfiih subunit h1 1.22333e-42
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain