Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Histone H1/H5

Term: IPR005818  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene101 biogeco3 v1.0 632
AutoFact: DNA-binding protein PcMYB1, putative [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: telomere repeat binding factor 1 0.0
Putative N-terminus
biog3_v1.0_unigene904 biogeco3 v1.0 336
AutoFact: phototropic-responsive NPH3-like protein [Arabidopsis thaliana] ref|NP_974103.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana] ref|NP_001185347.1| phototropic-responsive NPH3-like protein [Arabidopsis thaliana] sp|Q9C9V6.1|Y1790_ARATH Re 0.0
FL-Next: sp=BTB/POZ domain-containing protein NPY1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phototropic-responsive nph3-like protein 0.0
Putative C-terminus
biog3_v1.0_unigene1689 biogeco3 v1.0 388
AutoFact: Ku70 homolog [Populus nigra] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent dna helicase 2 subunit ku70 0.0
Internal
biog3_v1.0_unigene2886 biogeco3 v1.0 818
AutoFact: protein ELC [Arabidopsis thaliana] sp|Q9LHG8.1|ELC_ARATH RecName: Full=Protein ELC; Short=AtELC; AltName: Full=ESCRT-I complex subunit VPS23 homolog 1; AltName: Full=Vacuolar protein-sorting-associated protein 23 homolog 1 gb|AAG51025.1|AC069474_24 unknow 0.0
FL-Next: sp=Protein ELC; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein elc 0.0
N-terminus
biog3_v1.0_unigene3071 biogeco3 v1.0 319
AutoFact: Root phototropism protein, putative n=1 Tax=Ricinus communis RepID=B9SKU3_RICCO 0.0
Blast2go: btb poz domain-containing protein at1g30440-like 0.0
unknown
biog3_v1.0_unigene3278 biogeco3 v1.0 332
AutoFact: Ku70 homolog [Populus nigra] 0.0
Blast2go: atp-dependent dna helicase 2 subunit ku70 0.0
unknown
biog3_v1.0_unigene3764 biogeco3 v1.0 1075
AutoFact: histone H1-like protein [Zea mays] gb|ACN27409.1| unknown [Zea mays] 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: single myb histone 0.0
Putative Complete
biog3_v1.0_unigene4528 biogeco3 v1.0 935
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 2.0e-21
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone-like protein 6.59534e-40
Putative Complete
biog3_v1.0_unigene4950 biogeco3 v1.0 267
AutoFact: MYB transcription factor MYB107 [Glycine max] 3.0e-34
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: telomere repeat binding factor 1 0.0
Internal
biog3_v1.0_unigene6199 biogeco3 v1.0 468
AutoFact: Ku70 homolog [Populus nigra] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent dna helicase 2 subunit ku70 0.0
Internal
biog3_v1.0_unigene8462 biogeco3 v1.0 247
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-35
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h1 1.06569e-41
N-terminus
biog3_v1.0_unigene8745 biogeco3 v1.0 448
AutoFact: histone H1-like protein [Zea mays] gb|ACN27409.1| unknown [Zea mays] 2.00386e-43
Blast2go: single myb histone 0.0
unknown
biog3_v1.0_unigene9084 biogeco3 v1.0 249
AutoFact: protein ELC [Arabidopsis thaliana] sp|Q9LHG8.1|ELC_ARATH RecName: Full=Protein ELC; Short=AtELC; AltName: Full=ESCRT-I complex subunit VPS23 homolog 1; AltName: Full=Vacuolar protein-sorting-associated protein 23 homolog 1 gb|AAG51025.1|AC069474_24 unknow 0.0
Blast2go: protein elc 0.0
unknown
biog3_v1.0_unigene9207 biogeco3 v1.0 250
AutoFact: Phototropic-responsive NPH3 protein [Arabidopsis thaliana] sp|Q9FKB6.1|Y5880_ARATH RecName: Full=BTB/POZ domain-containing protein At5g48800 dbj|BAB09433.1| non-phototropic hypocotyl-like protein [Arabidopsis thaliana] gb|AED95726.1| Phototropic-responsiv 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene9659 biogeco3 v1.0 1166
AutoFact: Histone H1.1, putative n=1 Tax=Ricinus communis RepID=B9SH10_RICCO 0.0
FL-Next: sp=Histone H1; Zea mays (Maize). 0.0
Blast2go: telomere repeat binding factor 1 0.0
Complete
biog3_v1.0_unigene10113 biogeco3 v1.0 700
AutoFact: Putative histone H1 n=1 Tax=Cryptomeria japonica RepID=Q1XG59_CRYJA 1.0e-25
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 3.10277e-31
N-terminus
biog3_v1.0_unigene11488 biogeco3 v1.0 1005
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 1.0e-35
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h1 1.06569e-41
C-terminus
biog3_v1.0_unigene12082 biogeco3 v1.0 1185
AutoFact: Putative histone H1 n=2 Tax=Pinaceae RepID=Q84L42_PINPS 4.0e-27
FL-Next: tr=Putative histone H1; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h1 3.06217e-31
Complete
biog3_v1.0_unigene12117 biogeco3 v1.0 1279
AutoFact: Histone H1-like protein (Fragment) n=15 Tax=Picea sitchensis RepID=E0ZG68_PICSI 1.0e-28
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h1-like protein 2.10941e-32
Complete
biog3_v1.0_unigene17386 biogeco3 v1.0 154
AutoFact: Ku70 homolog [Populus nigra] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp-dependent dna helicase 2 subunit ku70 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain