Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: Domain of unknown function DUF1929

Term: IPR015202  Help

Source: InterPro from Sma3


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene263 biogeco3 v1.0 463
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Internal
biog3_v1.0_unigene2691 biogeco3 v1.0 660
AutoFact: Drf_FH1 multi-domain protein 2.0e-23
Putative coding
biog3_v1.0_unigene3445 biogeco3 v1.0 195
AutoFact: Drf_FH1 multi-domain protein 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 5.85891e-26
N-terminus
biog3_v1.0_unigene4334 biogeco3 v1.0 2340
AutoFact: Glyoxal oxidase n=5 Tax=Vitis RepID=C8CPQ2_VITVI 0.0
FL-Next: tr=Glyoxal oxidase; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene4722 biogeco3 v1.0 413
AutoFact: Drf_FH1 multi-domain protein 2.0e-16
Blast2go: protein 5.85891e-26
Coding
biog3_v1.0_unigene5126 biogeco3 v1.0 672
AutoFact: glyoxal oxidase-related protein [Arabidopsis thaliana] emb|CAB41193.1| putative protein [Arabidopsis thaliana] gb|AEE79679.1| glyoxal oxidase-related protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: galactose oxidase 0.0
Internal
biog3_v1.0_unigene6490 biogeco3 v1.0 430
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
unknown
biog3_v1.0_unigene6672 biogeco3 v1.0 344
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
N-terminus
biog3_v1.0_unigene7244 biogeco3 v1.0 625
AutoFact: glyoxal oxidase-related protein [Arabidopsis thaliana] gb|AAF43943.1|AC012188_20 Weak similarity to glyoxal oxidase (glx2) from Phanerochaete chrysosporium gb|L47287 [Arabidopsis thaliana] gb|AEE29162.1| glyoxal oxidase-related protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: galactose oxidase-like 0.0
Internal
biog3_v1.0_unigene8000 biogeco3 v1.0 345
AutoFact: Drf_FH1 multi-domain protein 2.0e-16
Blast2go: protein 5.85891e-26
Putative coding
biog3_v1.0_unigene8015 biogeco3 v1.0 385
AutoFact: Galactose oxidase, putative n=1 Tax=Ricinus communis RepID=B9R845_RICCO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: galactose oxidase-like 0.0
C-terminus
biog3_v1.0_unigene10179 biogeco3 v1.0 365
AutoFact: glyoxal oxidase-related protein [Arabidopsis thaliana] gb|AAF43943.1|AC012188_20 Weak similarity to glyoxal oxidase (glx2) from Phanerochaete chrysosporium gb|L47287 [Arabidopsis thaliana] gb|AEE29162.1| glyoxal oxidase-related protein [Arabidopsis thalia 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: galactose oxidase-like 0.0
Internal
biog3_v1.0_unigene10406 biogeco3 v1.0 494
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
C-terminus
biog3_v1.0_unigene10638 biogeco3 v1.0 677
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
FL-Next: sp=Probable splicing factor 3A subunit 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
N-terminus
biog3_v1.0_unigene10813 biogeco3 v1.0 566
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
unknown
biog3_v1.0_unigene13323 biogeco3 v1.0 339
AutoFact: Galactose oxidase, putative n=1 Tax=Ricinus communis RepID=B9R845_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: galactose oxidase-like 0.0
Internal
biog3_v1.0_unigene13413 biogeco3 v1.0 455
AutoFact: Galactose oxidase, putative n=1 Tax=Ricinus communis RepID=B9R845_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: galactose oxidase-like 0.0
Internal
biog3_v1.0_unigene14299 biogeco3 v1.0 409
AutoFact: glyoxal oxidase-related protein [Arabidopsis thaliana] gb|AAF43943.1|AC012188_20 Weak similarity to glyoxal oxidase (glx2) from Phanerochaete chrysosporium gb|L47287 [Arabidopsis thaliana] gb|AEE29162.1| glyoxal oxidase-related protein [Arabidopsis thalia 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: galactose oxidase-like 0.0
Putative N-terminus
biog3_v1.0_unigene14693 biogeco3 v1.0 225
AutoFact: Pollen Ole e 1 allergen and extensin [Medicago truncatula] 1.0e-24
Blast2go: pollen ole e 1 allergen and extensin family protein 1.09897e-31
Coding
biog3_v1.0_unigene15865 biogeco3 v1.0 310
AutoFact: splicing factor 3A subunit 1 [Arabidopsis thaliana] ref|NP_001117289.1| splicing factor 3A subunit 1 [Arabidopsis thaliana] sp|Q8RXF1.2|SF3A1_ARATH RecName: Full=Probable splicing factor 3A subunit 1 dbj|BAE98583.1| putative splicing factor [Arabidopsis t 0.0
Blast2go: probable splicing factor 3a subunit 1-like 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain